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Static recompilation of Majora's Mask (and soon Ocarina of Time) for PC (Windows/Linux)

C 4,995 254 Updated Jul 8, 2024

Protein structure alignment and search algorithm

C++ 20 3 Updated Jul 7, 2024

A static site generator for data apps, dashboards, reports, and more. Observable Framework combines JavaScript on the front-end for interactive graphics with any language on the back-end for data a…

TypeScript 2,155 86 Updated Jul 8, 2024

A concise API for exploratory data visualization implementing a layered grammar of graphics

HTML 4,120 172 Updated Jul 7, 2024

Strain resolver for metagenomics

Rust 66 9 Updated Jan 15, 2024

Read coverage calculator for metagenomics

Rust 278 30 Updated Jul 8, 2024

Read mapping pipeline for detection and measurement of virus pathogens from metagenomic or clinical data

Shell 16 1 Updated Nov 27, 2023

Discover and annotate the virome

Python 22 Updated Apr 10, 2024

Fast, robust ANI and aligned fraction for (metagenomic) genomes and contigs.

Rust 151 8 Updated Jul 5, 2024

Distilled and Refined Annotation of Metabolism: A tool for the annotation and curation of function for microbial and viral genomes

Python 239 50 Updated Jun 24, 2024

A fast and space-efficient pre-filter for querying very large collections of nucleotide sequences.

C++ 52 17 Updated Jul 8, 2024
Java 1 Updated Jun 14, 2024

fast, multithreaded sourmash operations: search, compare, and gather.

Python 13 2 Updated Jul 8, 2024

An extremely fast Python package installer and resolver, written in Rust.

Rust 14,763 419 Updated Jul 8, 2024

Streamlit — A faster way to build and share data apps.

Python 33,255 2,901 Updated Jul 8, 2024

Circular visualization in Python (Circos Plot, Chord Diagram, Radar Chart)

Python 662 40 Updated Jun 1, 2024

Making Protein folding accessible to all!

Jupyter Notebook 1,797 462 Updated Jul 7, 2024

Phage Annotation using Protein Structures

Python 47 3 Updated Jul 5, 2024

HyGen: Compact and Efficient Genome Sketching using Hyperdimensional Vectors

Rust 4 Updated Jun 29, 2024

A tool to raise the quality of viral genomes assembled from short-read metagenomes via resolving and joining of contigs fragmented during de novo assembly.

Python 50 8 Updated May 10, 2024

Reference-guided multiple sequence alignment of viral genomes

Python 57 8 Updated Apr 15, 2024

Fast viral consensus genome reconstruction

C++ 22 2 Updated Jun 28, 2024

Virus Identification By iteRative ANnoTation

Python 142 37 Updated Apr 15, 2024

VIRify: detection of phages and eukaryotic viruses from metagenomic and metatranscriptomic assemblies

Python 109 14 Updated May 8, 2024

An overview of all nanopack tools

Python 201 14 Updated Jun 2, 2023

Params validation plugin for Nextflow pipelines

Groovy 48 19 Updated Jul 5, 2024

Package management made easy

Rust 2,272 135 Updated Jul 8, 2024

An R package for estimating poly(A)-tail lengths in Oxford Nanopore RNA and DNA reads.

R 49 15 Updated Jun 10, 2024

Code and data for GeneGPT.

Python 359 25 Updated Feb 14, 2024

Rapid fuzzy string matching in Python using various string metrics

C++ 2,470 112 Updated Jul 8, 2024
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