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Issues list

Barcoding and training
#141 opened Apr 2, 2021 by tnn111
2
bonito with openvino error
#58 opened Oct 23, 2020 by studyfranco
@iiSeymour
5
Multi GPU train fails bug Something isn't working
#64 opened Nov 5, 2020 by usamec
@iiSeymour
12
Error with number of threads per block
#75 opened Nov 24, 2020 by Serka-M
@iiSeymour
2
Short reads and few repeats called with Bonito in non-model PromethION data enhancement New feature or request
#84 opened Dec 7, 2020 by andreaswallberg
@iiSeymour
1
Question regarding the quality of genomes assembled with bonito reads after polishing with medaka
#92 opened Dec 11, 2020 by DeanH10
bonito basecaller to have a resume mode enhancement New feature or request
#122 opened Feb 23, 2021 by Kirk3gaard
@iiSeymour
2
Bonito Convert
#123 opened Mar 2, 2021 by addyblanch
@iiSeymour
16
training dataset
#125 opened Mar 4, 2021 by visanuwan
@iiSeymour
1
Tuning pre-trained bonito model question Further information is requested
#131 opened Mar 12, 2021 by ktan8
@iiSeymour
2
Low qscore when bascalling by bonito question Further information is requested
#133 opened Mar 17, 2021 by libenping
@iiSeymour
1
Preparing training data for bonito
#137 opened Mar 22, 2021 by ktan8
8
RNA model for bonito enhancement New feature or request
#16 opened Mar 20, 2020 by CDieterich
@iiSeymour
10
Expect epoch time for training
#139 opened Apr 1, 2021 by callumparr
2
Bonito -> Flye -> Nanopolish over-correction?
#143 opened Apr 8, 2021 by hiroshisuga
1
Question about model training question Further information is requested
#175 opened Aug 20, 2021 by kuanchiun
@iiSeymour
4
Lowered barcode recognition of bonito basecalled data with Bonito 0.4.0
#176 opened Aug 30, 2021 by menickname
@iiSeymour
9
question about 'bonito train' help wanted Extra attention is needed
#178 opened Sep 7, 2021 by Flower9618
@iiSeymour
4
pair decoding of R2C2 data
#194 opened Oct 16, 2021 by christopher-vollmers
1
Model and training data for r10 models
#195 opened Oct 25, 2021 by singagan
1
RuntimeError: target_lengths must be of size batch_size bug Something isn't working
#197 opened Nov 16, 2021 by gao9842
@iiSeymour
1
CUDA out of memory
#205 opened Dec 9, 2021 by elohimarthur
@iiSeymour
4
basecaller compute_scores koi TypeError
#208 opened Dec 10, 2021 by jdemeul
4
Feature request: pass custom settings to mappy/minimap
#212 opened Dec 13, 2021 by billytcl
1
Retrieving every paths examined in beam search module
#397 opened Jun 25, 2024 by seungbeom-han
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