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Update PL to 1.3.8 #531

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merged 27 commits into from
Jul 13, 2021
Merged

Update PL to 1.3.8 #531

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78fe08c
update pl
Jul 6, 2021
e712f87
fix one test
Jul 6, 2021
453d589
our fix not needed anymore
Jul 6, 2021
5061ae6
fix yet another test
Jul 6, 2021
6086fbf
add new torchmetrics
Jul 6, 2021
c5ba75d
fix checkpoints
Jul 6, 2021
9b51611
fix some test
Jul 6, 2021
42717c4
fix one test more
Jul 6, 2021
4f4e302
attempt to fix test
Jul 6, 2021
b14c9df
Update byol code to match new pl bolts
Jul 6, 2021
eef975b
needed to update
Jul 6, 2021
9098534
back to how it was
Jul 6, 2021
6e4ebbc
update
Jul 6, 2021
076b881
update
Jul 6, 2021
99f87b5
changelog
Jul 7, 2021
e67d244
update regression metrics
Jul 7, 2021
3fb78c3
skip test on wind
Jul 7, 2021
15990b3
flake8
Jul 7, 2021
dc3c5fc
forgot to update this
Jul 7, 2021
0bb4a9a
mypy
Jul 8, 2021
bc55f10
remove comment
Jul 8, 2021
64eda34
try to see if problem comes from sync dist flag
Jul 8, 2021
26dea77
few fixes
Jul 9, 2021
ddfc302
Update expected number of subjects
Jul 9, 2021
b3400a2
correct more
Jul 9, 2021
6cf302d
flake8
Jul 9, 2021
f64576f
Merge branch 'main' into mel/update-pl
ant0nsc Jul 12, 2021
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Update expected number of subjects
  • Loading branch information
melanibe committed Jul 9, 2021
commit ddfc302bd4da352526a54ab0a8a93b4cc894e6e0
4 changes: 2 additions & 2 deletions RegressionTestResults/PR_Train2Nodes/OUTPUT/Train/epoch_metrics.csv
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subject_count,loss,learning_rate,Dice/AverageAcrossStructures,Dice/spinalcord,Dice/lung_r,Dice/lung_l,VoxelCount/spinalcord,VoxelCount/lung_r,VoxelCount/lung_l,epoch,cross_validation_split_index
1.000000,0.753852,0.000100,0.000000,0.000000,0.000000,0.000000,0.000000,18609.000000,61179.000000,0,-1
1.000000,0.773389,0.000090,0.000000,0.000000,0.000000,0.000000,0.000000,33453.000000,24258.500000,1,-1
4.000000,0.753852,0.000100,0.000000,0.000000,0.000000,0.000000,0.000000,18609.000000,61179.000000,0,-1
4.000000,0.773389,0.000090,0.000000,0.000000,0.000000,0.000000,0.000000,33453.000000,24258.500000,1,-1
4 changes: 2 additions & 2 deletions RegressionTestResults/PR_Train2Nodes/OUTPUT/Val/epoch_metrics.csv
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subject_count,loss,Dice/AverageAcrossStructures,Dice/spinalcord,Dice/lung_r,Dice/lung_l,VoxelCount/spinalcord,VoxelCount/lung_r,VoxelCount/lung_l,epoch,cross_validation_split_index
1.000000,0.758059,0.000000,0.000000,0.000000,0.000000,0.000000,32021.000000,48380.750000,0,-1
1.000000,0.758054,0.000000,0.000000,0.000000,0.000000,0.000000,32021.000000,48380.750000,1,-1
4.000000,0.758059,0.000000,0.000000,0.000000,0.000000,0.000000,32021.000000,48380.750000,0,-1
4.000000,0.758054,0.000000,0.000000,0.000000,0.000000,0.000000,32021.000000,48380.750000,1,-1
4 changes: 2 additions & 2 deletions RegressionTestResults/PR_TrainEnsemble/OUTPUT/Train/epoch_metrics.csv
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subject_count,loss,learning_rate,Dice/AverageAcrossStructures,Dice/spinalcord,Dice/lung_r,Dice/lung_l,VoxelCount/spinalcord,VoxelCount/lung_r,VoxelCount/lung_l,epoch,cross_validation_split_index
1.000000,0.720039,0.000100,0.000000,0.000000,0.000000,0.000000,0.000000,0.000000,110279.000000,0,0
1.000000,0.793326,0.000090,0.000000,0.000000,0.000000,0.000000,0.000000,43307.000000,3900.500000,1,0
2.000000,0.720039,0.000100,0.000000,0.000000,0.000000,0.000000,0.000000,0.000000,110279.000000,0,0
2.000000,0.793326,0.000090,0.000000,0.000000,0.000000,0.000000,0.000000,43307.000000,3900.500000,1,0
4 changes: 2 additions & 2 deletions RegressionTestResults/PR_TrainEnsemble/OUTPUT/Val/epoch_metrics.csv
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Original file line number Diff line number Diff line change
@@ -1,3 +1,3 @@
subject_count,loss,Dice/AverageAcrossStructures,Dice/spinalcord,Dice/lung_r,Dice/lung_l,VoxelCount/spinalcord,VoxelCount/lung_r,VoxelCount/lung_l,epoch,cross_validation_split_index
1.000000,0.721449,0.000000,0.000000,0.000000,0.000000,0.000000,0.000000,54751.500000,0,0
1.000000,0.721449,0.000000,0.000000,0.000000,0.000000,0.000000,0.000000,54751.500000,1,0
2.000000,0.721449,0.000000,0.000000,0.000000,0.000000,0.000000,0.000000,54751.500000,0,0
2.000000,0.721449,0.000000,0.000000,0.000000,0.000000,0.000000,0.000000,54751.500000,1,0