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EMBL-EBI
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bioconda-recipes Public
Forked from bioconda/bioconda-recipesConda recipes for the bioconda channel.
Shell MIT License UpdatedMay 24, 2024 -
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nf-core-tools Public
Forked from nf-core/toolsPython package with helper tools for the nf-core community.
Python MIT License UpdatedSep 30, 2023 -
MetaGOflow Public
Forked from emo-bon/MetaGOflowThis repository contains all CWL descriptions of the MGnify pipeline version 5.0 and their implementation for the Marine Genomic Observatories oriented pipeline, developed in the framework of an EO…
Python Apache License 2.0 UpdatedAug 5, 2023 -
mag Public
Forked from nf-core/magAssembly and binning of metagenomes
Nextflow MIT License UpdatedMar 15, 2023 -
toil Public
Forked from DataBiosphere/toilA scalable, efficient, cross-platform (Linux/macOS) and easy-to-use workflow engine in pure Python.
Python Apache License 2.0 UpdatedJan 16, 2023 -
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microbetag Public
microbetag attempts to be a microbial interactions co-occurrence network annotator
Python UpdatedMar 16, 2022 -
streamflow Public
Forked from alpha-unito/streamflowStreamFlow Workflow Manager
Python GNU Lesser General Public License v3.0 UpdatedFeb 17, 2022 -
cwl-format Public
Forked from rabix/cwl-formatA very opinionated code formatter for CWL
Common Workflow Language Apache License 2.0 UpdatedNov 11, 2021 -
cloud-toolkit Public
Forked from Rfam/rfam-cloud-toolkitTerraform configuration to deploy nfs server on cloud infrastructures
HCL UpdatedMar 16, 2021 -
MAG_Snakemake_wf Public
Forked from Finn-Lab/MAG_Snakemake_wfRecovery of prokaryotic genomes from shotgun metagenomic sequencing data
Python Other UpdatedNov 16, 2020 -
cwltest Public
Forked from common-workflow-language/cwltestFramework for testing CWL tools and workflows
Python Apache License 2.0 UpdatedJul 29, 2020 -
cwltool Public
Forked from common-workflow-language/cwltoolCommon Workflow Language reference implementation
Python Apache License 2.0 UpdatedJul 3, 2020 -
bio-cwl-tools Public
Forked from common-workflow-library/bio-cwl-toolsCommon Workflow Language Apache License 2.0 UpdatedMay 8, 2020 -
django-debug-toolbar-mongo Public
Forked from hmarr/django-debug-toolbar-mongoMongoDB panel for the Django Debug Toolbar
Python MIT License UpdatedOct 2, 2019 -
django-rest-framework-json-api Public
Forked from django-json-api/django-rest-framework-json-apiJSON API support for Django REST Framework
Python BSD 2-Clause "Simplified" License UpdatedAug 14, 2019 -
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autoDocstring Public
Forked from NilsJPWerner/autoDocstringvscode extension that generates docstrings for python files
TypeScript MIT License UpdatedApr 18, 2019 -
A simple (really simple) use case of the ebi-metagenomics-webkit
JavaScript UpdatedApr 8, 2019 -
conway-gol-ts Public
Conway's Game of Life in Typescript
TypeScript GNU General Public License v3.0 UpdatedJun 30, 2017 -
dotkmer Public
A simple kmer counter in dotNet core - a toy project
C# The Unlicense UpdatedFeb 28, 2017 -
bac-genomics-scripts Public
Forked from aleimba/bac-genomics-scriptsCollection of scripts for bacterial genomics
Perl GNU General Public License v3.0 UpdatedFeb 16, 2017 -
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sorghum-bicolor-M81E-16S Public
Supplementary Material of the paper: The structure and the composition of the sweet sorghum (Sorghum bicolor) bacterial endophytic bacteriales community is affected by chemical N-fertilization in t…
Shell MIT License UpdatedOct 27, 2016 -
csharp-sparkpost Public
Forked from darrencauthon/csharp-sparkpostSparkPost client library for the C# Programming Language
C# Apache License 2.0 UpdatedApr 8, 2016 -
barrnap Public
Forked from tseemann/barrnapBacterial ribosomal RNA predictor
Perl GNU General Public License v3.0 UpdatedMay 20, 2015 -
Toolkit for processing sequences in FASTA/Q formats
C UpdatedMar 25, 2015