A guide to reading scientific papers

A list of Free Software network services and web applications which can be hosted on your own servers

Teju Jagua

[EN-US] Scrapes papers from SciELO and summarizes them using Llama3 | [PT-BR] Extrai artigos do SciELO e os resume utilizando Llama3

Developer Manual for BEAST 2 projects

Materials for the course on Bayesian model building run at Second Faculty of Medicine at Charles University in Prague

Second exam for the subject of Bayesian Statistics based on weakly informative priors for logistic regression

Re-evaluating the evidence for fecal microbiota transplantation "super-donors" in inflammatory bowel diseases

Music Theory in R

Automatic forecasting and Bayesian modeling for time series with Stan

Code for "Meta-analysis of Bayesian Analyses"

an R package for structural equation modeling and more

Replication of "Towards Automated Circuit Discovery for Mechanistic Interpretability" paper

Generalised Additive Extreme Value Models for Location, Scale and Shape

Bayesian linear models, a compact detailed explanation and a simple Python implementation with efficient numeric techniques

Code used in the analysis of the effective reproduction number and the dispersion parameter of SARS-CoV-2.

R package for accessing Fragile Families metadata

Epidemic curve analyzer

The repository contains the code that generates the data used on the probabilistic forecast map of the platform.

R package to visualize, manipulate, and summarize MCMC output

Convert SNPs in VCF format to PHYLIP, NEXUS, binary NEXUS, or FASTA alignments for phylogenetic analysis

Self-tuning HMC algorithms and evaluations

Survival package for R

Vectorised distributions for R

NBZIMM (Negative Binomial and Zero-Inflated Mixed Models)