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get_jgi_genomes Public
A quick and easy way to download the genomes/predicted proteins of taxa available in JGI's Genome Portal.
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paramecium Public
Scripts and data file for An RNAi-dependent punishment for algal elimination in a phototrophic endosymbiosis.
R UpdatedAug 6, 2024 -
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genomics_adventure Public
Workshop on Genomics - Genomics Adventure
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PR2-curation Public
Forked from delCampoLab/PR2-curationPR2 curation: a shiny app version of the EukRef data curation pipeline
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blastocladiella Public
The genome of Blastocladiella emersonii
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PlanktoScope Public
Forked from PlanktoScope/PlanktoScopeLow-cost fluidic microscope for citizen science
HTML Creative Commons Attribution Share Alike 4.0 International UpdatedMay 17, 2022 -
Ukraine Public
Forked from hejny/UkraineHelp Ukraine - add ribbon with Ukraine flag into the website you manage, show the anti-war message to Russian users, or block them from your service.
TypeScript Apache License 2.0 UpdatedMar 28, 2022 -
UpSetR Public
Forked from hms-dbmi/UpSetRAn R implementation of the UpSet set visualization technique published by Lex, Gehlenborg, et al..
R Other UpdatedFeb 7, 2022 -
bioconda-recipes Public
Forked from bioconda/bioconda-recipesConda recipes for the bioconda channel.
Shell UpdatedFeb 3, 2022 -
get_ensembl_genomes Public
A quick and easy way to download the genomes/predicted proteins of taxa available from ENSEMBL Genomes
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Phylogenomic-analysis Public
Forked from nickatirwin/Phylogenomic-analysisUseful scripts for conducting phylogenomic analyses.
Python UpdatedAug 26, 2021 -
orchardDB Public
π π³ A script to create and populate a local database of amino acid sequences combined with taxonomic information, the AA gene predictions can be retrieved from a variety of genome-portals and then β¦
Perl UpdatedJul 5, 2021 -
orchard Public
π± π β‘οΈ π± β‘οΈ π΄ π² π³ - A quick phylogenetic tree building pipeline!
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taxdump_edit Public
π± β‘οΈ π³ Add new taxa or taxonomic groups to the NCBI Taxdump files
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MMseqs2 Public
Forked from soedinglab/MMseqs2MMseqs2: ultra fast and sensitive search and clustering suite
C++ GNU General Public License v3.0 UpdatedJan 28, 2020 -
evomics_2019 Public
Creating the Virtual Machine (AMI) for the evomics.org Workshops
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sagawe Public
βͺ β‘οΈ π βΉοΈ A suggested workflow, and accompanying scripts, to assemble Single Amplified Genomes (SAGs) from MDA derived Hi/MiSeq (Overlapped) Paired-End Illumina Libraries.
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markdown_readme Public
Forked from fefong/markdown_readmeMarkdown - you can mark up titles, lists, tables, etc., in a much cleaner, readable and accurate way if you do it with HTML.
UpdatedOct 13, 2019 -
orthomcl_tools Public
A couple of tools I find indispensable for post orthomcl down-stream analysis.
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busco_hmms_for_anvio Public
Making BUSCO HMMs useable in Anvi'o.
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web Public
Forked from merenlab/merenlab.orgWeb content for Meren Lab
HTML MIT License UpdatedJul 21, 2018 -
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evomics_2018 Public
Creating the VM setup for the evomics.org Workshop on Genomics
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hyphochytrium Public
Data files belonging to the Hyphochytrium catenoides Genome Project
HTML UpdatedNov 29, 2017 -
hugo-academic Public
Forked from HugoBlox/hugo-blox-builderThe personal website framework for Hugo. Demo at
HTML MIT License UpdatedNov 19, 2017 -
assembly-stats Public
Forked from rjchallis/assembly-statsAssembly statistic visualisation
JavaScript MIT License UpdatedOct 5, 2017