30 Pull requests merged by 6 people

• Rationalized chitinase terms; fixes #28722

  #28754 merged Aug 23, 2024

• fixed parents, definitions, fixes #23553

  #28750 merged Aug 23, 2024

• Update reaction participants

  #28745 merged Aug 23, 2024

• created new term fixes #28746

  #28748 merged Aug 23, 2024

• obsoleted terms fixes #28339

  #28747 merged Aug 23, 2024

• obsoleted terms fixes #27326

  #28744 merged Aug 23, 2024

• adding mapping or high level mapping to catalytic activity terms. Fur…

  #28743 merged Aug 22, 2024

• Changed to L-arginine and L-valine biosynthetic process; fixes #28686

  #28742 merged Aug 22, 2024

• Add taxon constraint; fixes #28736.

  #28741 merged Aug 22, 2024

• Added fibrous body-membranous organelle; #28736

  #28739 merged Aug 22, 2024

• Refresh PR import.

  #28703 merged Aug 22, 2024

• Update design pattern docs

  #28724 merged Aug 22, 2024

• Update reaction participants

  #28730 merged Aug 22, 2024

• Issue 28728

  #28738 merged Aug 21, 2024

• Added a tRNA methyltransferase activity; fixes #28550

  #28737 merged Aug 21, 2024

• Redo taxon constraints.

  #28734 merged Aug 21, 2024

• Obsoleted GO:0106339; #28550.

  #28729 merged Aug 21, 2024

• Obsoleted oligosaccharyltransferase complex subtypes; fixes #28714.

  #28727 merged Aug 20, 2024

• Obsoleted 3-methylcrotonyl-CoA carboxylase complex, mitochondrial for…

  #28726 merged Aug 20, 2024

• obsoleted term fixes #28041

  #28725 merged Aug 20, 2024

• Update only_in_taxon.tsv

  #28723 merged Aug 20, 2024

• Refresh SO import.

  #28704 merged Aug 20, 2024

• Update design pattern docs

  #28709 merged Aug 20, 2024

• Update reaction participants

  #28706 merged Aug 20, 2024

• Update issue templates

  #28629 merged Aug 20, 2024

• unobsoleted terms for #28261

  #28720 merged Aug 20, 2024

• Created cysteine-dependent adenosine diphosphate thiazole synthase ac…

  #28719 merged Aug 20, 2024

• Revised lauroyltransferase activity; #28340.

  #28718 merged Aug 19, 2024

• closes #28672; closes #28227

  #28715 merged Aug 19, 2024

• Refresh ChEBI import.

  #28699 merged Aug 19, 2024

2 Pull requests opened by 2 people

• Update never_in_taxon.tsv

  #28717 opened Aug 19, 2024

• Update design pattern docs

  #28751 opened Aug 23, 2024

20 Issues closed by 5 people

• Chitinase activity & children

  #28722 closed Aug 23, 2024

• Obsoletion request: GO:0019857 5-methylcytosine metabolic process & children

  #28732 closed Aug 23, 2024

• Heterochromatin assembly vs. formation

  #23553 closed Aug 23, 2024

• NTR: [N-acetyltaurine hydrolase activity]

  #28746 closed Aug 23, 2024

• lipase activity edits

  #28339 closed Aug 23, 2024

• glucose transmembrane transporter relationships

  #27326 closed Aug 23, 2024

• NTR: L-valine biosynthetic process

  #28686 closed Aug 22, 2024

• NTR: fibrous body-membranous organelle

  #28736 closed Aug 22, 2024

• Textual definition update: GO_0035098 - ESC/E(Z) complex

  #28327 closed Aug 22, 2024

• NTR: positive regulation of androgen receptor signaling pathway

  #28728 closed Aug 21, 2024

• Query RNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase

  #28550 closed Aug 21, 2024

• Obsoletion request: GO:0102167 & GO:0102166

  #27061 closed Aug 21, 2024

• Obsoletion request: oligosaccharyltransferase complex subtypes

  #28714 closed Aug 20, 2024

• Term merge: 3-methylcrotonyl-CoA carboxylase complex, mitochondrial & methylcrotonoyl-CoA carboxylase complex

  #28023 closed Aug 20, 2024

• Term name & textual & definition update: GO:0009331 glycerol-3-phosphate dehydrogenase complex

  #26862 closed Aug 20, 2024

• Obsoletion request: GO:0004023 alcohol dehydrogenase activity, metal ion-independent

  #27182 closed Aug 20, 2024

• Taxon constraint: GO:0042597

  #27838 closed Aug 20, 2024

• NTR: Suicidal Thiazole Synthase (yeast thi4)

  #28713 closed Aug 20, 2024

• Obsoletion request: GO:0016254 preassembly of GPI anchor in ER membrane

  #28227 closed Aug 19, 2024

• Obsoletion request: GO:1904925 positive regulation of autophagy of mitochondrion in response to mitochondrial depolarization

  #28672 closed Aug 19, 2024

6 Issues opened by 4 people

• Aligning pectinesterase with RHEA

  #28753 opened Aug 23, 2024

• Textual definition update: GO:0003951 NAD+ kinase activity

  #28752 opened Aug 23, 2024

• Malformed xref Match qualifier lines

  #28740 opened Aug 22, 2024

• Missing parent: GO:0006857 oligopeptide transport

  #28735 opened Aug 21, 2024

• GO:0003997 acyl-CoA oxidase activity children

  #28733 opened Aug 21, 2024

• NTR: Man(5)GlcNac(2)-PP-dolichol ER flippase activity

  #28721 opened Aug 20, 2024

18 Unresolved conversations

Sometimes conversations happen on old items that aren’t yet closed. Here is a list of all the Issues and Pull Requests with unresolved conversations.

• True path violations under NON proteinogenic amino acid metabolic process

  #28546 commented on Aug 19, 2024 • 0 new comments

• Update term label GO:0000448 cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

  #27230 commented on Aug 19, 2024 • 0 new comments

• Taxon constraint: GO:0004131 cytosine deaminase activity

  #28689 commented on Aug 19, 2024 • 0 new comments

• Taxon constraint: GO:0009089 | lysine biosynthetic process via diaminopimelate

  #28519 commented on Aug 19, 2024 • 0 new comments

• Taxon constraint: GO:0035658 Mon1-Ccz1 complex

  #28687 commented on Aug 19, 2024 • 0 new comments

• Obsoletion request: GO:0035629 N-terminal protein amino acid N-linked glycosylation;

  #28538 commented on Aug 20, 2024 • 0 new comments

• Obsoletion request: Some reductase activities

  #28287 commented on Aug 20, 2024 • 0 new comments

• Mapping file from KO to GO

  #28712 commented on Aug 20, 2024 • 0 new comments

• Restructure GO:0022857 transmembrane transporter activity branch

  #27495 commented on Aug 21, 2024 • 0 new comments

• alcohol dehydrogenase/aldo-keto reductase hierarchy

  #28532 commented on Aug 22, 2024 • 0 new comments

• acyltransferase activity terms to obsolete

  #28467 commented on Aug 22, 2024 • 0 new comments

• beta-N-acetylhexosaminidase terms

  #28398 commented on Aug 22, 2024 • 0 new comments

• Are these the same? GO:0052654 L-leucine transaminase activity/GO:0050048 L-leucine:2-oxoglutarate aminotransferase activity

  #28682 commented on Aug 22, 2024 • 0 new comments

• broad/narrow xref qualifiers are not exported in OBO JSON format

  #28558 commented on Aug 22, 2024 • 0 new comments

• Obsoletion request: GO:0080002 UDP-glucose:4-aminobenzoate acylglucosyltransferase activity

  #28273 commented on Aug 23, 2024 • 0 new comments

• Pathway (BP) terms with multiple MetaCyc mappings

  #28527 commented on Aug 23, 2024 • 0 new comments

• Catalytic activity terms with no cross references

  #28340 commented on Aug 23, 2024 • 0 new comments

• Add KEGG and MetaCyc to one-to-one checks.

  #28252 commented on Aug 19, 2024 • 0 new comments