Update ChEBI pH 7.3 mapping #109
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Update ChEBI pH 7.3 mapping | |
| on: | |
| workflow_dispatch: | |
| schedule: | |
| - cron: '0 4 * * 0' | |
| jobs: | |
| update: | |
| runs-on: ubuntu-latest | |
| container: obolibrary/odkfull:${{ vars.ODK_VERSION }} | |
| steps: | |
| - name: Checkout repo | |
| uses: actions/checkout@v4 | |
| - name: Work around https://github.com/peter-evans/create-pull-request/issues/1170 | |
| run: git config --global --add safe.directory "$GITHUB_WORKSPACE" | |
| - name: Update ChEBI pH 7.3 mapping | |
| run: cd src/ontology && rm ../biochebi/chebi_pH7_3_mapping.tsv && make ../biochebi/chebi_pH7_3_mapping.tsv && cd ../.. | |
| - name: Create PR | |
| uses: peter-evans/create-pull-request@v5 | |
| with: | |
| title: Update ChEBI pH 7.3 mapping | |
| branch: update-chebi-pH-7-3 | |
| token: ${{ secrets.PR_ACTION_TOKEN }} |