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Popular repositories

  1. CaImAn CaImAn Public

    Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.

    Python 609 360

  2. DeepFRI DeepFRI Public

    Deep functional residue identification

    Python 282 69

  3. finufft finufft Public

    Non-uniform fast Fourier transform library of types 1,2,3 in dimensions 1,2,3

    C++ 260 72

  4. CaImAn-MATLAB CaImAn-MATLAB Public

    Complete Matlab pipeline for large scale calcium imaging data analysis

    MATLAB 247 146

  5. NoRMCorre NoRMCorre Public

    Matlab routines for online non-rigid motion correction of calcium imaging data

    MATLAB 135 84

  6. deepblast deepblast Public

    Neural Networks for Protein Sequence Alignment

    Python 107 17

Repositories

Showing 10 of 170 repositories
  • ccn-software-fens-2024 Public

    Materials for CCN software workshop at FENS 2024

    flatironinstitute/ccn-software-fens-2024’s past year of commit activity
    Python 3 MIT 0 1 1 Updated Jun 20, 2024
  • nemos Public

    NEural MOdelS, a statistical modeling framework for neuroscience.

    flatironinstitute/nemos’s past year of commit activity
    Python 37 MIT 7 74 5 Updated Jun 19, 2024
  • neuroRSE Public

    Website for CCN's neuroRSE group

    flatironinstitute/neuroRSE’s past year of commit activity
    CSS 1 MIT 0 0 0 Updated Jun 19, 2024
  • nemos-workshop-feb-2024 Public

    Materials for nemos workshop, Feb 2024

    flatironinstitute/nemos-workshop-feb-2024’s past year of commit activity
    Python 0 MIT 0 5 1 Updated Jun 19, 2024
  • stan-playground Public

    Run Stan models in the browser

    flatironinstitute/stan-playground’s past year of commit activity
    TypeScript 3 Apache-2.0 0 21 8 Updated Jun 19, 2024
  • MutantAutoMate Public
    flatironinstitute/MutantAutoMate’s past year of commit activity
    Python 0 0 2 2 Updated Jun 19, 2024
  • cppdlr Public

    Discrete Lehmann representation of imaginary time Green's functions

    flatironinstitute/cppdlr’s past year of commit activity
    C++ 8 Apache-2.0 3 1 0 Updated Jun 18, 2024
  • finufft Public

    Non-uniform fast Fourier transform library of types 1,2,3 in dimensions 1,2,3

    flatironinstitute/finufft’s past year of commit activity
    C++ 260 72 44 (3 issues need help) 10 Updated Jun 18, 2024
  • flathub Public

    A simple elasticsearch frontend for serving astrophysical simulation catalog data

    flatironinstitute/flathub’s past year of commit activity
    Haskell 10 Apache-2.0 5 14 0 Updated Jun 18, 2024
  • sciware Public

    Learning materials for scientific software development

    flatironinstitute/sciware’s past year of commit activity
    HTML 74 34 2 0 Updated Jun 18, 2024
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