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Issues list

[fix] revert jdom upgrade
#66 by devkhan was merged Jul 11, 2024 Loading…
1
@devkhan
Build broken after jdom upgrade bug
#65 by devkhan was closed Jul 11, 2024
1
@devkhan
Bump junit from 4.12 to 4.13.1 dependencies Pull requests that update a dependency file
#61 by dependabot bot was merged Feb 8, 2022 Loading…
Dev
#60 by draeger was merged Feb 8, 2022 Loading…
Fixed issues in GUI and conversion to SBGN + added empty set nodes for exchange reactions bug enhancement
#58 by eikept was merged Feb 8, 2022 Loading…
21
Bump junit from 4.12 to 4.13.1 dependencies Pull requests that update a dependency file
#57 by dependabot bot was merged Oct 13, 2020 Loading…
Minor changes
#55 by DEVetter was merged Dec 24, 2019 Loading…
4
When compartment boundaries should be inferred and no x and y coordin…
#53 by MariaHei was merged Jul 29, 2019 Loading…
WriteEscherJson can now create new files
#50 by MariaHei was merged Jul 29, 2019 Loading…
WriteEscherJson cannot create new files bug
#49 by MariaHei was closed Jul 29, 2019
If layout id and model id are the same, layout id is changed
#48 by MariaHei was merged Jul 28, 2019 Loading…
Inability to detect nodes leads to NullPointerException bug
#46 by MariaHei was closed Jul 29, 2019
1
Fixed dependencies on website and added myself as author
#43 by MariaHei was merged Jun 12, 2019 Loading…
Added pom entries and generated resources for github page
#42 by MariaHei was merged Jun 12, 2019 Loading…
Added index.html
#41 by MariaHei was merged Jun 11, 2019 Loading…
Generated docs for maven website
#40 by MariaHei was merged May 15, 2019 Loading…
Wrote comments wherever appropriate
#39 by MariaHei was merged May 15, 2019 Loading…
1
Update readme
#38 by MariaHei was merged Apr 30, 2019 Loading…
@MariaHei
5
Arrows of SBML files without curveSegments are shown
#37 by MariaHei was merged Apr 29, 2019 Loading…
Converting .json file to .sbml and back returns an IllegalArgumentException bug
#36 by MariaHei was closed Jul 29, 2019
3
ReconMap returns NullPointerException bug
#35 by MariaHei was closed Jun 28, 2024
2
Connections gone after conversion enhancement
#34 by anusurendra was closed Apr 29, 2019
@draeger @MariaHei
23
WARNING: java.lang.IllegalArgumentException: Invalid label bounds
#33 by anusurendra was closed Jan 14, 2019
4
Going the reverse direction: from standard format to Escher map stale Issues too old to fix/implement. Might be taken up later or in a new format.
#32 by Midnighter was closed Jun 28, 2024
2
Live version returns a 403 Forbidden
#31 by bdelepine was closed May 25, 2018
3
ProTip! Exclude everything labeled bug with -label:bug.