Commits

History for

Commits on May 3, 2024

still restrict matplotlib<3.9
lldelisle
committedMay 3, 2024

Commits on Jan 21, 2023

change requirement
lldelisle
committedJan 21, 2023

Commits on Dec 7, 2022

update requirements
lldelisle
committedDec 7, 2022

Commits on Feb 17, 2022

Commits on Feb 2, 2022

add new track Maf with bx-python
lldelisle
committedFeb 2, 2022

Commits on Jan 18, 2022

go up to 3.5.1
lldelisle
committedJan 18, 2022

Commits on Aug 19, 2021

use pyfaidx
lldelisle
committedAug 19, 2021

Commits on Aug 18, 2021

different tests for matplotlib no more travis
lldelisle
committedAug 18, 2021

Commits on Oct 30, 2020

use a different requirement file for travis
lldelisle
committedOct 30, 2020

Commits on Oct 29, 2020

Change matplotlib version
lldelisle
committedOct 29, 2020

Commits on Oct 12, 2020

Update version 3.5.1 (#290 )

lldelisle
and
joachimwolff
committedOct 12, 2020

Commits on Jul 16, 2020

restrict libopenblas
lldelisle
committedJul 16, 2020
test locally python3.8 with pip (#255 )
lldelisle
committedJul 16, 2020

Commits on Jun 3, 2020

require hicmatrix>=13
lldelisle
committedJun 3, 2020
Merge branch 'develop' of https://github.com/deeptools/pyGenomeTracks into pRegionForAll
lldelisle
committedJun 3, 2020

Commits on Mar 23, 2020

Update requirements.txt
joachimwolff
committedMar 23, 2020

Commits on Jan 9, 2020

added pybedtools
lldelisle
committedJan 9, 2020

Commits on Dec 17, 2019

added a progress bar with tqdm
lldelisle
committedDec 17, 2019

Commits on Dec 9, 2019

pin to strict matplotlib release
bgruening
committedDec 9, 2019

Commits on Dec 8, 2019

increase and loosen matplotlib requirements
bgruening
committedDec 8, 2019

Commits on Nov 26, 2019

ini format (#132 )
LeilyR
committedNov 26, 2019

Commits on Oct 25, 2019

change requirements and travis like in hicexplorer
lldelisle
committedOct 25, 2019
added nose to requirements
lldelisle
committedOct 25, 2019

Commits on Oct 23, 2019

updated dependency of pybigwig to be compatible with numpy
lldelisle
committedOct 23, 2019

Commits on Aug 20, 2019

unify dependencies between the 3 files
lldelisle
committedAug 20, 2019

Commits on Jul 23, 2019

added gffutils to requirements.txt
lldelisle
committedJul 23, 2019

Commits on Mar 5, 2019

upgrade requirements to address #37
fidelram
committedMar 5, 2019

Commits on Sep 10, 2018

Forcing the newest numpy version
joachimwolff
committedSep 10, 2018

Commits on Sep 9, 2018

Unfixing versions, maybe it helps to let the last test case pass
joachimwolff
committedSep 9, 2018

Commits on Sep 3, 2018

Replacing HiCExplorer dependency with HiCMatrix. Adding feature to load only the required region for Hi-C cool data files.
joachimwolff
committedSep 3, 2018

Commits on Mar 27, 2018

updated requirements to HiCExplorer 2.1.1
fidelram
committedMar 27, 2018

Commits on Mar 26, 2018

fixed pysam dependency
fidelram
committedMar 26, 2018
added pysam as dependency, needed for tabix support
fidelram
committedMar 26, 2018