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fix fully overlap reads #1220

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fix fully overlap reads #1220

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d89bb84
fix numpy
y9c Jan 19, 2023
2d93f8f
update versions of tool wrappers
lldelisle May 31, 2023
dd04af4
macrofy the profile version
lldelisle Jun 1, 2023
810c135
Merge pull request #1218 from lldelisle/galaxy_tools_update
bgruening Jun 1, 2023
780019b
Merge branch 'deeptools:master' into master
y9c Jun 4, 2023
d8ebbb9
Update countReadsPerBin.py
y9c Jun 4, 2023
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Update countReadsPerBin.py
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@y9c
y9c committed Jun 4, 2023
commit d8ebbb9efe1f9157e4dec6b65d87417c9e522881
2 changes: 1 addition & 1 deletion deeptools/countReadsPerBin.py
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Original file line number Diff line number Diff line change
Expand Up @@ -899,7 +899,7 @@ def get_fragment_from_read(self, read):
fragmentStart = int(fragmentCenter - read.infer_query_length(always=False) / 2)
fragmentEnd = fragmentStart + read.infer_query_length(always=False)

assert fragmentStart < fragmentEnd, "fragment start greater than fragment" \
assert fragmentStart <= fragmentEnd, "fragment start greater than fragment" \
"end for read {}".format(read.query_name)
return [(fragmentStart, fragmentEnd)]

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