Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

No norm in hicCompareMatrices #645

Merged
merged 3 commits into from
Mar 3, 2021
Merged

Conversation

lldelisle
Copy link
Collaborator

Add an option to not normalize matrices before operation.
If you are interested, please tell me and I will write tests.

@joachimwolff
Copy link
Collaborator

Looks good to me. Please provide test cases.

@lldelisle
Copy link
Collaborator Author

I just added a test on the part I did so:

  • Multiply each value of a given matrix by 2 -> new matrix
  • difference between this new matrix and the original one without --noNorm gives 0
  • difference between this new matrix and the original one with --noNorm gives the original one.

@lldelisle
Copy link
Collaborator Author

Some tests are failing but they are not mine: loop_test_narrowPeak and loop_test_broadPeak

@joachimwolff joachimwolff merged commit f28567a into deeptools:develop Mar 3, 2021
@joachimwolff joachimwolff mentioned this pull request Jul 27, 2021
2 tasks
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

None yet

2 participants