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Showing results

Code to calculate Moran's I in R quickly and memory efficiently

C++ 14 Updated Aug 12, 2020

Friends don't let friends make certain types of data visualization - What are they and why are they bad.

R 6,459 248 Updated Nov 25, 2024

AnnData interoperability in R

R 60 11 Updated Nov 15, 2024

LIANA: a LIgand-receptor ANalysis frAmework

R 182 31 Updated Aug 7, 2024

A package to help convert different single-cell data formats to each other

R 387 57 Updated Feb 28, 2024

MultiNicheNet: a flexible framework for differential cell-cell communication analysis from multi-sample multi-condition single-cell transcriptomics data

HTML 125 14 Updated Nov 19, 2024

synthspot: package to generate synthetic Visium-like spot data

R 3 3 Updated May 16, 2024

https://sparrow-pipeline.readthedocs.io/en/latest/

Python 23 Updated Oct 15, 2024

build net work from skeleton image (2D-3D)

Python 226 48 Updated Mar 23, 2022