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beyondcell
beyondcell PublicBeyondcell is a computational methodology for identifying tumour cell subpopulations with distinct drug responses in single-cell RNA-seq and Spatial Transcriptomics data.
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- pandrugs-db Public
cnio-bu/pandrugs-db’s past year of commit activity - cluster_rnaseq Public
cnio-bu/cluster_rnaseq’s past year of commit activity - beyondcell Public
Beyondcell is a computational methodology for identifying tumour cell subpopulations with distinct drug responses in single-cell RNA-seq and Spatial Transcriptomics data.
cnio-bu/beyondcell’s past year of commit activity - breast-bcspatial Public
Code used to produce the final figures and tables of the study "Spatial Transcriptomics in Breast Cancer Reveals Tumour Microenvironment-Driven Drug Responses and Clonal Therapeutic Heterogeneity".
cnio-bu/breast-bcspatial’s past year of commit activity - ST-preprocess Public
Pipelines to preprocess 10x Visium data, including spot filtering and deconvolution, normalization and beyondcell score calculation.
cnio-bu/ST-preprocess’s past year of commit activity - SSc-breast Public Forked from cnio-bu/drug_susceptibility_collection
A snakemake pipeline to generate the transcriptomic signatures of breast cancer drug susceptibility used in "Spatial Transcriptomics in Breast Cancer Reveals Tumour Microenvironment-Driven Drug Responses and Clonal Therapeutic Heterogeneity".
cnio-bu/SSc-breast’s past year of commit activity
