Stars
binary releases of VS Code without MS branding/telemetry/licensing
Streisand sets up a new server running your choice of WireGuard, OpenConnect, OpenSSH, OpenVPN, Shadowsocks, sslh, Stunnel, or a Tor bridge. It also generates custom instructions for all of these s…
OSS-Fuzz - continuous fuzzing for open source software.
⚡ From finding text to search and replace, from sorting to beautifying text and more 🎨
A curated list of delightful Bash scripts and resources.
NOTE: Most of the contents of this repository have been migrated to the new devcontainers GitHub org (https://github.com/devcontainers). See https://github.com/devcontainers/template-starter and ht…
Conda recipes for the bioconda channel.
A repository of namespaced, composable shell (bash, sh and dash) function libraries. Takes aware the pain of shell scripting, making it robust and reusable. Includes secure curl usage, JSON, XML an…
Repository for Dev Container Templates that are managed by Dev Container spec maintainers. See https://github.com/devcontainers/template-starter to create your own!
[ICLR 2024] DNABERT-2: Efficient Foundation Model and Benchmark for Multi-Species Genome
🆔 Scan contig files against PubMLST typing schemes
VGP repository for the genome assembly working group
Bash script to download/update snapshots of files from NCBI genomes repository (refseq/genbank) with track of changes and without redundancy
MuDoGeR makes the recovery of genomes from prokaryotes, viruses, and eukaryotes from metagenomes easy.
Sample configuration to deploy a modern data platform.
Shell script to run OpenRefine in batch mode (import, transform, export). It orchestrates OpenRefine (server) and a python client that communicates with the OpenRefine API.
Remove CCS reads with remnant PacBio adapter sequences and convert outputs to a compressed .fastq (.fastq.gz).
Desciption & scripts of how to deploy The Littlest JupyterHub with a Julia kernel
Julia Development Container Feature
Julia Development Container Template