1st place solution of Kaggle Open Problems - Multimodal Single-Cell Integration

Implementation for MatMul-free LM.

A nanoGPT pipeline packed in a spreadsheet

Implementation of Diffusion Transformer (DiT) in JAX

Video+code lecture on building nanoGPT from scratch

Python code for fine-tuning AlphaFold to perform protein-peptide binding predictions

Biological sequence analysis for the modern age.

NicheNet: predict active ligand-target links between interacting cells

Implementation of Alphafold 3 in Pytorch

LLMs for microplate data

Kolmogorov Arnold Networks

Compute generation probabilities of CDR3 amino acid and nucleotide sequences

Public RFDiffusionAA repo

The official Meta Llama 3 GitHub site

A scriptable music downloader for Qobuz, Tidal, SoundCloud, and Deezer

Grok open release

Precision HLA typing from next-generation sequencing data

An 'antidote' to the recently released AI poison pill project known as Nightshade.

Implementation of Denoising Diffusion Probabilistic Model in Pytorch

Code for Fast Training of Diffusion Models with Masked Transformers

Google AI 2018 BERT pytorch implementation

Friends don't let friends make certain types of data visualization - What are they and why are they bad.

Segment Anything in Medical Images

python tools for TCR:peptide-MHC modeling and analysis

Defense Against the Dark Arts

Implementation of Enformer, Deepmind's attention network for predicting gene expression, in Pytorch