Eukaryotic Genome Annotation Pipeline-External caller scripts and documentation

A fast image processing library with low memory needs.

Full-featured and highly configurable SFTP, HTTP/S, FTP/S and WebDAV server - S3, Google Cloud Storage, Azure Blob

Galaxy integration of cBioPortal

Python text processing, pattern matching, and NLP framework

Project code for BioHackathon Europe 2024.

A dataset for loading zarr files to be used in machine learning training pipelines

A Rust HTTP server for Python applications

Download GTN data and upload to Onedata cloud service

A fast K-mer counter for high-fidelity shotgun datasets

Robust Speech Recognition via Large-Scale Weak Supervision

🐉 🪰 Assemble bacterial isolate genomes from Nanopore reads

Pgtune - tuning PostgreSQL config by your hardware

ShellCheck, a static analysis tool for shell scripts

Miscellaneous Galaxy tool wrappers

Scalable datastore for metrics, events, and real-time analytics

The ERGA Assembly Reports repository

Tool Shed repositories maintained by Lucille Lopez-Delisle

MACS -- Model-based Analysis of ChIP-Seq

Dockerized deployment of the shiny-phyloseq app

Examples of Galaxy data_source servers

Dockerized deployment of the ideal package

Minimal setup required to run Galaxy under Kubernetes

Galaxy on AWS Guidance provides all the infrastructure components required to run Galaxy in the cloud and are preconfigured with industry best practices for infrastructure monitoring and security, …

CUDA on AMD GPUs

Simon's Data Club - Reference data for Galaxy servers