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Adds docker guide
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samhorsfield96 committed Apr 3, 2024
1 parent 916faa6 commit 263f0e7
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions config.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -12,8 +12,8 @@ cgt_exe: /path/to/cgt/exe
cgt_breaks: 0.05,0.95
cgt_error: 0.05

# choice of clustering method, either 'mmseqs2' or 'panaroo'
# choice of clustering method, either "mmseqs2" or "panaroo"
clustering_method: "panaroo"

# must be one of 'strict', 'moderate' or 'sensitive'
# must be one of "strict", "moderate" or "sensitive"
panaroo_stringency: "strict"

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