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Showing results

Pairwise whole genome aligner

C 132 5 Updated Sep 6, 2024

A Neovim (lua) plugin for working with a markdown zettelkasten / wiki and mixing it with a journal, based on telescope.nvim

Lua 1,353 86 Updated Aug 4, 2024

Wipe and reinstall a running Linux system via SSH, without rebooting. You know you want to.

Shell 7,178 354 Updated Jul 27, 2021

A cat(1) clone with wings.

Rust 48,724 1,229 Updated Sep 1, 2024
1 Updated Aug 16, 2024

Bioinformatics shell scripts for reference (Polar and Polar2020)

Shell 5 Updated Feb 12, 2024

A fast multi-threaded k-mer counter

C++ 462 136 Updated Mar 20, 2024

A cross-platform and ultrafast toolkit for FASTA/Q file manipulation

Go 1,278 157 Updated Sep 12, 2024

Online R learning for applied statistics

479 98 Updated Jul 11, 2024

Mac-style shortcut keys for Linux & Windows.

Python 4,371 213 Updated Jun 11, 2024

RepeatMasker is a program that screens DNA sequences for interspersed repeats and low complexity DNA sequences.

Perl 226 49 Updated Sep 13, 2024

A curated list of awesome Bioinformatics libraries and software.

3,080 597 Updated Apr 2, 2024

Extensive de-novo TE Annotator

Perl 333 73 Updated Sep 12, 2024

Python library to facilitate genome assembly, annotation, and comparative genomics

Python 741 187 Updated Sep 6, 2024

Master the command line, in one page

152,797 14,530 Updated Jun 25, 2024

BRAKER is a pipeline for fully automated prediction of protein coding gene structures with GeneMark-ES/ET/EP/ETP and AUGUSTUS in novel eukaryotic genomes

Perl 348 79 Updated May 13, 2024

My Minimal Fasta Toolkit

Rust 6 Updated Mar 21, 2024
HTML 2 Updated Feb 1, 2022

Tidyverse workshop for Northwestern Data Science and Programming Workshops Summer 2019

R 3 2 Updated Feb 21, 2020
1 Updated Jun 22, 2021
HTML 1 Updated Oct 14, 2021

The new GATK-based pipeline for wild isolate C. elegans strains

Nextflow 1 3 Updated Aug 30, 2024

Super small biological datasets for unit testing

Python 18 4 Updated Apr 22, 2024

C++ API & command-line toolkit for working with BAM data

C++ 415 153 Updated Jul 12, 2024

scikit-bio: a community-driven Python library for bioinformatics, providing versatile data structures, algorithms and educational resources.

Python 880 267 Updated Sep 6, 2024

NMA Computational Neuroscience course

Jupyter Notebook 2,656 984 Updated Aug 15, 2024

Legendary - A free and open-source replacement for the Epic Games Launcher

Python 4,586 161 Updated Aug 24, 2024

Zulip server and web application. Open-source team chat that helps teams stay productive and focused.

Python 21,197 7,663 Updated Sep 14, 2024

python module to plot beautiful and highly customizable genome browser tracks

Python 755 111 Updated Jul 10, 2024

ScummVM main repository

C++ 2,276 1,021 Updated Sep 16, 2024
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