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  • SLU, the Swedish University of Agricultural Sciences
  • Uppsala
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amrei-bp/README.md

Hi there 👋 I am Amrei Binzer-Panchal,

a bioinformatician and the head of SLU's bioinformatics infrastructure, Slubi.

I support researchers at The Swedish Agricultural University in matters of bioinformatics in a variety of ways, such as performing bioinformatic analyses, developing workflows on request, teaching, or simply answering questions that come up when running analyses.

With a background in biology and ecology, I have started my bioinformatics career with microarrays, but have since worked on sequence based data, performing analyses such as expression analyses, genotyping, single cell analyses, GWAS, metagenomics analyses, and more.

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  1. SLUBioinformaticsInfrastructure/quarto_homepage SLUBioinformaticsInfrastructure/quarto_homepage Public

    JavaScript

  2. nf-metavir nf-metavir Public

    Forked from jhayer/nf-metavir

    Nexflow pipeline for viral metagenomics analyses

    Nextflow

  3. SLUBioinformaticsInfrastructure/Nextflow_training_qc_pipeline SLUBioinformaticsInfrastructure/Nextflow_training_qc_pipeline Public

    This is a short pipeline for students to improve their understanding on using Nextflow as a workflow manager.

    Nextflow 1

  4. SLUBioinformaticsInfrastructure/SBD_booklet SLUBioinformaticsInfrastructure/SBD_booklet Public

    This is the code for the booklet for SLU's Day of Bioinformatics in September 2023.

    TeX

  5. SLUBioinformaticsInfrastructure/Three_Bees_Workshop_Series SLUBioinformaticsInfrastructure/Three_Bees_Workshop_Series Public

    This is the repository for the collaborative workshop series between SLUBI and SLU's Center for Statistics.

    HTML 1 1

  6. rnaseq-exercises rnaseq-exercises Public

    A repository to practice RNASeq exercises using Gitpod

    Shell