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  • plotxy Public

    Plot tabular data from the command line

    Rust Updated Aug 6, 2024

  • tantivy_warc_indexer Public

    builds a tantivy index from common crawl warc.wet files

    search index commoncrawl tantivy
    Rust 9 Updated Jun 16, 2024

  • fastx Public

    Rust fast FastQ and Fasta reader library

    Rust 2 Creative Commons Attribution Share Alike 4.0 International Updated Jan 21, 2024

  • plotters Public

    Forked from plotters-rs/plotters

    A rust drawing library focus on data plotting for both WASM and native applications 🦀 📈🚀

    Rust MIT License Updated Sep 4, 2023

  • ffindex Public

    simple index/database for huge amounts of small files

    C 6 2 Creative Commons Attribution Share Alike 4.0 International Updated May 21, 2023

  • pyfastq_filter Public

    Filter FASTQ Files.

    Python 2 1 MIT License Updated Feb 17, 2023

  • longread_plots Public

    A collection of plots for long read sequencing FastQ files from devices like Oxford Nanopore's MinION and PromethION.

    nanopore plot fastq longread qualitycontrol
    Python 12 BSD 2-Clause "Simplified" License Updated Feb 14, 2023

  • minimap2-rs Public

    Forked from jguhlin/minimap2-rs
    Rust Other Updated Jan 25, 2023

  • lrdf Public

    Long Read (ONT) Data Frame

    Rust GNU Lesser General Public License v2.1 Updated Jan 17, 2023

  • hist-cli Public

    Commandline tool for plotting frequency ranked histograms of TSV/CSV data

    Rust 8 1 Creative Commons Attribution Share Alike 4.0 International Updated Jan 16, 2023

  • spider Public

    Forked from spider-rs/spider

    Multithreaded Web spider crawler written in Rust.

    Rust MIT License Updated May 29, 2022

  • add_hashid_by_domain Public

    To a list of URLS add hash ID based on domain

    Rust MIT License Updated Apr 29, 2022

  • osf_search Public

    OSF Search example frontend

    CSS 1 Creative Commons Zero v1.0 Universal Updated Apr 23, 2022

  • entrez-rs Public

    Forked from Zenleaf/entrez-rs

    A Rust wrapper around the Entrez API. Helps you access the Entrez API using idiomatic Rust. It also provides tools to parse the XML results from Entrez.

    Rust Updated Dec 15, 2021

  • coreutils Public

    Forked from uutils/coreutils

    Cross-platform Rust rewrite of the GNU coreutils

    Rust MIT License Updated Jul 31, 2021

  • tantivy-cli Public

    Forked from quickwit-oss/tantivy-cli
    Rust MIT License Updated Jun 1, 2021

  • Tech-Ai-Math-VR-Robotics-Quantum Public

    1 Creative Commons Zero v1.0 Universal Updated Feb 13, 2021

  • weave Public

    Forked from jsdw/weave

    A simple CLI router for wiring together several sources behind a single HTTP endpoint

    Rust MIT License Updated Jan 25, 2020

  • ffindexrs Public

    rust implementation of FFindex

    Rust Apache License 2.0 Updated Nov 19, 2019

  • pandas Public

    Forked from pandas-dev/pandas

    Flexible and powerful data analysis / manipulation library for Python, providing labeled data structures similar to R data.frame objects, statistical functions, and much more

    Python BSD 3-Clause "New" or "Revised" License Updated Nov 2, 2019

  • fastx_reader Public

    FastQ and Fasta readers for NIM

    Nim 1 GNU Lesser General Public License v3.0 Updated Jul 22, 2019

  • packages Public

    Forked from nim-lang/packages

    List of packages for Nimble

    Nim Updated Jul 22, 2019

  • demultiplex_fastq Public

    Simple, fast and memory efficient demultiplexer for FASTQ sequencing files

    C 1 MIT License Updated May 31, 2019

  • pyfastq_reader Public

    Pure Python FASTQ reader. Faster than you think.

    Python 2 1 MIT License Updated Feb 12, 2019

  • hh-suite Public

    Forked from soedinglab/hh-suite

    Remote protein homology detection suite.

    C++ Other Updated Jan 11, 2019

  • weighted_distance Public

    Ocaml programm for weighted edit distance. See http:https://www.cip.ifi.lmu.de/~hauser/papers/unsupervisedHistIR.pdf

    OCaml 1 Updated Sep 12, 2015

  • qseq2fastq Public

    qseq2fastq converst Illumina Deep Sequencing Qseq files to more commonly used FastQ format.

    C 1 MIT License Updated Aug 27, 2015