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23 Open 140 Closed
23 Open 140 Closed
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Issues list

multiple single cell samples question Further information is requested
#211 opened Jul 10, 2024 by wanghlv
3
Long time to run 80+ samples togather input data Issue is caused by input data performance Issues related to computational perfromance
#210 opened Jul 8, 2024 by yuyun-zhang
2
Memory usage performance Issues related to computational perfromance
#209 opened Jul 5, 2024 by omarelgarwany
6
Choosing the ‘--data_type’ parameter for combined PacBio CCS and Nanopore data question Further information is requested
#208 opened Jul 1, 2024 by biochristmas
4
A Novel transcript without high-confidence reads support weird results Something looks odd in the resulting files
#207 opened Jun 27, 2024 by yuyun-zhang
2
invalid continuation byte error input data Issue is caused by input data third-party problem Problem is related to other tools, libraries, system etc
#206 opened Jun 25, 2024 by cariocow
6
Question about exon counting question Further information is requested
#205 opened Jun 20, 2024 by weib3
2
read assignments file interpretation question Further information is requested
#204 opened Jun 16, 2024 by sparthib
1
Under the Reference-base model, TSS and TTS are not accurately annotated. weird results Something looks odd in the resulting files
#203 opened Jun 14, 2024 by zpliu1126
3
trying to understand the OUT.novel_vs_known.SQANTI-like.tsv weird results Something looks odd in the resulting files
#202 opened Jun 13, 2024 by sparthib
4
An inaccurate annotation weird results Something looks odd in the resulting files
#200 opened Jun 13, 2024 by zpliu1126
3
Isoquant seems stuck input data Issue is caused by input data performance Issues related to computational perfromance
#197 opened Jun 6, 2024 by francicco
12
The issue of matching between the expanded GTF and transcript types
#194 opened May 27, 2024 by biochristmas
2
Add sample label to read_assignments.tsv/transcript_model_reads.tsv based on --labels? enhancement New feature or request
#192 opened May 21, 2024 by yangao07
1
isoquant terminated abruptly during multi-sample input
#191 opened May 20, 2024 by dongdongdong0203
2
gene_id attribute value cannot be found enhancement New feature or request input data Issue is caused by input data
#190 opened May 17, 2024 by sqwwww
2
Memory exceeded when running single cell data alignment performance Issues related to computational perfromance
#189 opened May 16, 2024 by Qirongmao97
19
TPM value difference of a sample between runs question Further information is requested
#181 opened May 5, 2024 by abhijitcbio
2
run isoquant on several samples question Further information is requested weird results Something looks odd in the resulting files
#180 opened May 3, 2024 by linalu1121
3
--read_group:file functionality working in release version? weird results Something looks odd in the resulting files
#167 opened Mar 13, 2024 by HabiBBBaghirov
10
Bug: missing transcript annotations (present by StringTie) weird results Something looks odd in the resulting files
#148 opened Feb 7, 2024 by sarahcalvo
2
readthrough transcripts enhancement New feature or request
#101 opened Jul 17, 2023 by rsalz
1
Issue in identifying 3′ end position enhancement New feature or request weird results Something looks odd in the resulting files
#92 opened Jun 19, 2023 by seungbeom-han
4
ProTip! Adding no:label will show everything without a label.