Skip to content
@Hoffmann-Lab

Hoffmann-Lab

Popular repositories Loading

  1. bashbone bashbone Public

    A bash/biobash library for workflow and pipeline design

    Shell 7 3

  2. TEdetectionEvaluation TEdetectionEvaluation Public

    Tool comparison for detecting differentially expressed individual transposable elements

    R 7 1

  3. muvac muvac Public

    MUVAC implements multiple variant calling options from Exome-Seq/WG-Seq or RNA-Seq data. It offers free GATK best-practices in an optimized, parallelized fashion.

    Shell 4 3

  4. shournal shournal Public

    Forked from tycho-kirchner/shournal

    Log shell-commands and used files. Snapshot executed scripts. Fully automatic.

    C++ 3

  5. rippchen rippchen Public

    Peak calling from *IP-Seq or differential expression- and ontology analysis from RNA-Seq data

    Shell 1 1

  6. STageR STageR Public

    STage of aging estimatoR: Cluster-based epigenetic clockwise classifier predicting the aging stage

    HTML 1

Repositories

Showing 10 of 10 repositories
  • shournal Public Forked from tycho-kirchner/shournal

    Log shell-commands and used files. Snapshot executed scripts. Fully automatic.

    Hoffmann-Lab/shournal’s past year of commit activity
    C++ 3 GPL-3.0 9 0 0 Updated Sep 14, 2024
  • rippchen Public

    Peak calling from *IP-Seq or differential expression- and ontology analysis from RNA-Seq data

    Hoffmann-Lab/rippchen’s past year of commit activity
    Shell 1 GPL-3.0 1 0 0 Updated Jun 21, 2024
  • bashbone Public

    A bash/biobash library for workflow and pipeline design

    Hoffmann-Lab/bashbone’s past year of commit activity
    Shell 7 GPL-3.0 3 0 0 Updated Jun 21, 2024
  • STageR Public

    STage of aging estimatoR: Cluster-based epigenetic clockwise classifier predicting the aging stage

    Hoffmann-Lab/STageR’s past year of commit activity
    HTML 1 GPL-3.0 0 0 0 Updated Jan 25, 2024
  • muvac Public

    MUVAC implements multiple variant calling options from Exome-Seq/WG-Seq or RNA-Seq data. It offers free GATK best-practices in an optimized, parallelized fashion.

    Hoffmann-Lab/muvac’s past year of commit activity
    Shell 4 GPL-3.0 3 0 0 Updated Sep 8, 2023
  • PhyloEpiGenomics Public
    Hoffmann-Lab/PhyloEpiGenomics’s past year of commit activity
    R 0 GPL-3.0 0 0 0 Updated Feb 2, 2023
  • hydroxyclock Public

    Elastic net model for age prediction based on DNA hydroxymethylation

    Hoffmann-Lab/hydroxyclock’s past year of commit activity
    R 0 0 0 0 Updated Jun 25, 2022
  • TEdetectionEvaluation Public

    Tool comparison for detecting differentially expressed individual transposable elements

    Hoffmann-Lab/TEdetectionEvaluation’s past year of commit activity
    R 7 1 0 0 Updated Jan 7, 2022
  • hydi Public

    calling differential hydroxymethylation

    Hoffmann-Lab/hydi’s past year of commit activity
    C 0 GPL-3.0 2 0 0 Updated Apr 20, 2021
  • readiator Public

    Tool to simulate RNA-Seq data.

    Hoffmann-Lab/readiator’s past year of commit activity
    Python 0 1 0 0 Updated Feb 12, 2021

Top languages

Loading…

Most used topics

Loading…