Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Option to mark a gene as partial in Apollo #2565

Closed
uliboehme opened this issue Feb 10, 2021 · 1 comment · Fixed by #2573
Closed

Option to mark a gene as partial in Apollo #2565

uliboehme opened this issue Feb 10, 2021 · 1 comment · Fixed by #2573
Labels
BBSRC
Projects
2.6.3 LTS

Comments

@uliboehme
Copy link
Collaborator

Similar to Artemis it would be good to have an option in Apollo to mark a gene as partial. Attached is a screenshot showing the database version of Artemis with the tick boxes 3'partial, 5'partial.
Artemis_partial
@nathandunn nathandunn added this to To do in 2.6.3 LTS via automation Feb 10, 2021
@nathandunn
Copy link
Contributor

This may be worth doing in Apollo directly now in order to make sure that the API is directly sufficient.

@nathandunn nathandunn moved this from To do to In progress in 2.6.3 LTS Feb 12, 2021
nathandunn added a commit that referenced this issue Feb 12, 2021
@nathandunn
fixes #2565 - removes featureLocationPublications
f5a0ac1
@nathandunn nathandunn mentioned this issue Feb 12, 2021
Merged
13 tasks
2.6.3 LTS automation moved this from In progress to Done Feb 16, 2021
nathandunn added a commit that referenced this issue Feb 16, 2021
@nathandunn
fixes #2565 - removes featureLocationPublications (#2573)
8149e2a 
* fixes #2565 - removes featureLocationPublications

* partial fmin and fmax get in there , but not yet saved to the DB

* added obsolete to client

* fixed JSON output

* fixed some broken errors

* udpate partials for genes properly now

* implemented in GFF3 output

* fixed partial children

* in transcript panel now

* fixed look and feel

* finished obsoletes

* updated changedoc and rest doc
@garrettjstevens garrettjstevens mentioned this issue May 6, 2022
Merged
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
BBSRC
Projects
No open projects
2.6.3 LTS
Done
Milestone
No milestone
Development

Successfully merging a pull request may close this issue.

fixes #2565 - removes featureLocationPublications GMOD/Apollo
2 participants
@nathandunn @uliboehme