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@AllenInstitute

Allen Institute

Please visit http:https://alleninstitute.github.io/ for more information.

Pinned

  1. AllenSDK AllenSDK Public

    code for reading and processing Allen Institute for Brain Science data

    Jupyter Notebook 331 149

  2. dipde dipde Public

    Numerical solver for coupled population density equations

    Python 21 13

Repositories

Showing 10 of 371 repositories
  • openscope_databook Public

    OpenScope databook: a collaborative, versioned, data-centric collection of foundational analyses for reproducible systems neuroscience 🐁🧠🔬🖥️📈

    AllenInstitute/openscope_databook’s past year of commit activity
    Python 56 17 8 0 Updated Jun 23, 2024
  • deep-neurographs Public

    Neuron reconstruction framework that detects and corrects false splits in a predicted segmentation.

    AllenInstitute/deep-neurographs’s past year of commit activity
    Python 2 MIT 0 0 1 Updated Jun 22, 2024
  • mtrain_regimens Public

    Repository to track training stages and regimens for visual behavior

    AllenInstitute/mtrain_regimens’s past year of commit activity
    Python 2 4 14 0 Updated Jun 21, 2024
  • npc_lims Public

    Tools to fetch and update paths, metadata and state for Mindscope Neuropixels sessions, in the cloud.

    AllenInstitute/npc_lims’s past year of commit activity
    Python 0 MIT 0 7 0 Updated Jun 21, 2024
  • MIES Public

    Multichannel Igor Electrophysiology Suite

    AllenInstitute/MIES’s past year of commit activity
    IGOR Pro 21 6 268 7 Updated Jun 21, 2024
  • SHIELD_Dynamic_Gating_Analysis Public

    Code to analyze dynamic gating nwbs with data collected using the SHIELD implant

    AllenInstitute/SHIELD_Dynamic_Gating_Analysis’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Jun 21, 2024
  • AllenInstitute/np_notebooks’s past year of commit activity
    Jupyter Notebook 0 3 0 0 Updated Jun 21, 2024
  • openscope_psycode Public Forked from AllenInstitute/openscope_sequencelearning_stim

    This repository contains the stimulus behind the PsyCode project

    AllenInstitute/openscope_psycode’s past year of commit activity
    Python 1 Apache-2.0 8 0 1 Updated Jun 21, 2024
  • np_session Public

    Tools for accessing data, metadata, and jobs related to ecephys and behavior sessions for the Mindscope Neuropixels team.

    AllenInstitute/np_session’s past year of commit activity
    Python 1 1 1 0 Updated Jun 20, 2024
  • abc_atlas_access Public

    Documentation and examples demonstrating how to access data from the Allen Brain Cell Atlas

    AllenInstitute/abc_atlas_access’s past year of commit activity
    Jupyter Notebook 44 18 12 5 Updated Jun 20, 2024

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