The SILVA ribosomal RNA gene database project: improved data processing and web-based tools (Q29547623)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23193283%20AND%20SRC:MED&resulttype=core&format=json

19 February 2020

title

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools (English)

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=23193283

23 April 2017

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23193283%20AND%20SRC:MED&resulttype=core&format=json

19 February 2020

0 references

1 reference

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23193283%20AND%20SRC:MED&resulttype=core&format=json

19 February 2020

Pelin Yilmaz

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23193283%20AND%20SRC:MED&resulttype=core&format=json

19 February 2020

Frank Oliver Glöckner

8

object named as

Frank Oliver Glöckner

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23193283%20AND%20SRC:MED&resulttype=core&format=json

19 February 2020

1

Christian Quast

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23193283%20AND%20SRC:MED&resulttype=core&format=json

19 February 2020

7

Jörg Peplies

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23193283%20AND%20SRC:MED&resulttype=core&format=json

19 February 2020

author name string

Jan Gerken

4

1 reference

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19 February 2020

Timmy Schweer

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23193283%20AND%20SRC:MED&resulttype=core&format=json

19 February 2020

Pablo Yarza

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23193283%20AND%20SRC:MED&resulttype=core&format=json

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=23193283

19 February 2020

language of work or name

1 reference

23 April 2017

publication date

28 November 2012

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23193283%20AND%20SRC:MED&resulttype=core&format=json

19 February 2020

published in

Nucleic Acids Research

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=23193283

23 April 2017

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23193283%20AND%20SRC:MED&resulttype=core&format=json

19 February 2020

volume

41

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=23193283

23 April 2017

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23193283%20AND%20SRC:MED&resulttype=core&format=json

19 February 2020

issue

Database issue

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=23193283

23 April 2017

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23193283%20AND%20SRC:MED&resulttype=core&format=json

19 February 2020

page(s)

D590-6

2 references

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23 April 2017

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23193283%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution-NonCommercial 3.0 Unported

19 February 2020

copyright license

start time

4 October 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

The International Nucleotide Sequence Database Collaboration

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531112

Search and clustering orders of magnitude faster than BLAST

23 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531112

QIIME allows analysis of high-throughput community sequencing data

23 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531112

Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities

23 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531112

The Ribosomal Database Project: improved alignments and new tools for rRNA analysis

23 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531112

The metagenomics RAST server - a public resource for the automatic phylogenetic and functional analysis of metagenomes

23 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531112

RNAmmer: consistent and rapid annotation of ribosomal RNA genes

23 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531112

Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB

23 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531112

The New Higher Level Classification of Eukaryotes with Emphasis on the Taxonomy of Protists

23 April 2017

1 reference

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ARB: a software environment for sequence data

23 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531112

SINA: accurate high-throughput multiple sequence alignment of ribosomal RNA genes.

23 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531112

Release LTPs104 of the All-Species Living Tree

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531112

Megx.net: integrated database resource for marine ecological genomics.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531112

The All-Species Living Tree project: a 16S rRNA-based phylogenetic tree of all sequenced type strains

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531112

probeBase--an online resource for rRNA-targeted oligonucleotide probes: new features 2007.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531112

The ribosomal database project (RDP-II): introducing myRDP space and quality controlled public data

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531112

Archaeal diversity in waters from deep South African gold mines

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531112

List of Bacterial Names with Standing in Nomenclature: a folder available on the Internet

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531112

Novel lineages of Planctomycetes densely colonize the alkaline gut of soil-feeding termites (Cubitermes spp.).

3 June 2018

1 reference

https://pubmed.ncbi.nlm.nih.gov/23193283

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

3 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=23193283

23 April 2017

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23193283%20AND%20SRC:MED&resulttype=core&format=json

journals/nar/QuastPYGSYPG13

19 February 2020

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

5ce70284-2c49-3866-874a-0d0f404da175

28 January 2021

Mendeley publication ID

1 reference

https://www.mendeley.com/catalogue/5ce70284-2c49-3866-874a-0d0f404da175/

title

The SILVA ribosomal RNA gene data... preview & related info | Mendeley (British English)

9 October 2022

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=23193283

3 references

23 April 2017

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23193283%20AND%20SRC:MED&resulttype=core&format=json

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=23193283

19 February 2020

PubMed publication ID

3 references

23 April 2017

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23193283%20AND%20SRC:MED&resulttype=core&format=json