Download MendeleyCrystal structure of the human KIF9 motor domain in complex with ADP
Zhu, H., Tempel, W., He, H., Shen, Y., Wang, J., Brothers, G., Landry, R., Arrowsmith, C.H., Edwards, A.M., Sundstrom, M., Weigelt, J., Bochkarev, A., Park, H.To be published.
3NWN
Crystal structure of the human KIF9 motor domain in complex with ADP
- PDB DOI: https://doi.org/10.2210/pdb3NWN/pdb
- Entry: 3NWN supersedes: 2NR8
- Classification: CONTRACTILE PROTEIN
- Organism(s): Homo sapiens
- Expression System: Trichoplusia ni
- Mutation(s): No
- Deposited: 2010-07-09 Released: 2010-07-21
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 Å
- R-Value Free: 0.277
- R-Value Work: 0.224
Starting Model: experimental
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This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Kinesin-like protein KIF9 | 359 | Homo sapiens | Mutation(s): 0 Gene Names: KIF9 |  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q9HAQ2 (Homo sapiens) Explore Q9HAQ2 Go to UniProtKB: Q9HAQ2 | |||||
PHAROS: Q9HAQ2 GTEx: ENSG00000088727 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q9HAQ2 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 4 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| ADP Query on ADP | D [auth A] | ADENOSINE-5'-DIPHOSPHATE C10 H15 N5 O10 P2 XTWYTFMLZFPYCI-KQYNXXCUSA-N |  | ||
| CL Query on CL | C [auth A] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |  | ||
| MG Query on MG | B [auth A] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |  | ||
| UNX Query on UNX | E [auth A] F [auth A] G [auth A] H [auth A] I [auth A] | UNKNOWN ATOM OR ION X |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 Å
- R-Value Free: 0.277
- R-Value Work: 0.224
- Space Group: P 63
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 90.443 | α = 90 |
| b = 90.443 | β = 90 |
| c = 76.38 | γ = 120 |
| Software Name | Purpose |
|---|---|
| DENZO | data reduction |
| SCALEPACK | data scaling |
| PHASER | phasing |
| REFMAC | refinement |
| PDB_EXTRACT | data extraction |
Entry History
Deposition Data
- Released Date: 2010-07-21 Deposition Author(s): Zhu, H., Tempel, W., He, H., Shen, Y., Wang, J., Brothers, G., Landry, R., Arrowsmith, C.H., Edwards, A.M., Sundstrom, M., Weigelt, J., Bochkarev, A., Park, H., Structural Genomics Consortium (SGC)
- This entry supersedes: 2NR8
Revision History (Full details and data files)
- Version 1.0: 2010-07-21
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance - Version 1.2: 2017-11-08
Changes: Refinement description - Version 1.3: 2023-09-06
Changes: Data collection, Database references, Derived calculations, Refinement description
