Yates et al., 1995 - Google Patents

Method to correlate tandem mass spectra of modified peptides to amino acid sequences in the protein database

Yates et al., 1995

Document ID
8813338991950909094
Author
Yates J
Eng J
McCormack A
Schieltz D
Publication year
Publication venue
Analytical chemistry

External Links

Snippet

A method to correlate uninterpreted tandem mass spectra of modified peptides, produced under low-energy (10-50 eV) collision conditions, with amino acid sequences in a protein database has been developed. The fragmen-tation patterns observed in the tandem mass …
Continue reading at pubs.acs.org (other versions)

Classifications

    • G—PHYSICS
    • G01—MEASURING; TESTING
    • G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00—Investigating or analysing materials by specific methods not covered by the preceding groups
    • G01N33/48—Investigating or analysing materials by specific methods not covered by the preceding groups biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/68—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving proteins, peptides or amino acids
    • G01N33/6803—General methods of protein analysis not limited to specific proteins or families of proteins
    • G01N33/6848—Methods of protein analysis involving mass spectrometry
    • G—PHYSICS
    • G01—MEASURING; TESTING
    • G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00—Investigating or analysing materials by specific methods not covered by the preceding groups
    • G01N33/48—Investigating or analysing materials by specific methods not covered by the preceding groups biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/68—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving proteins, peptides or amino acids
    • G01N33/6803—General methods of protein analysis not limited to specific proteins or families of proteins
    • G01N33/6842—Proteomic analysis of subsets of protein mixtures with reduced complexity, e.g. membrane proteins, phosphoproteins, organelle proteins

Similar Documents

Publication Publication Date Title
Yates et al. Method to correlate tandem mass spectra of modified peptides to amino acid sequences in the protein database
ES2199986T3 (en) IDENTIFICATION OF AMINO ACIDS THROUGH MASS SPECTROMETRY.
Eng et al. An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database
Yates et al. Peptide mass maps: a highly informative approach to protein identification
Yates et al. Mining genomes: correlating tandem mass spectra of modified and unmodified peptides to sequences in nucleotide databases
EP0887646B1 (en) A method for de novo peptide sequence determination
Stensballe et al. Characterization of phosphoproteins from electrophoretic gels by nanoscale Fe (III) affinity chromatography with off‐line mass spectrometry analysis
Li et al. Database searching and accounting of multiplexed precursor and product ion spectra from the data independent analysis of simple and complex peptide mixtures
Zhang et al. ProbIDtree: an automated software program capable of identifying multiple peptides from a single collision‐induced dissociation spectrum collected by a tandem mass spectrometer
US7783429B2 (en) Peptide sequencing from peptide fragmentation mass spectra
JP6020314B2 (en) Chromatographic mass spectrometry data processor
Smith et al. The use of accurate mass tags for high-throughput microbial proteomics
Tsai et al. Precursor ion independent algorithm for top-down shotgun proteomics
US7693665B2 (en) Identification of modified peptides by mass spectrometry
EP1317765A2 (en) Automated identification of peptides
Sidhu et al. Bioinformatic assessment of mass spectrometric chemical derivatisation techniques for proteome database searching
Johnson et al. Sequence analysis of peptide mixtures by automated integration of Edman and mass spectrometric data
McCormack et al. Peptide sequence analysis on quadrupole mass spectrometers
Stults Peptide sequencing by mass spectrometry
Riter et al. Comparison of the Paul ion trap to the linear ion trap for use in global proteomics
Xu et al. A hierarchical MS2/MS3 database search algorithm for automated analysis of phosphopeptide tandem mass spectra
Nakanishi et al. Direct on-membrane peptide mass fingerprinting with MALDI–MS of tyrosine-phosphorylated proteins detected by immunostaining
Kassel et al. Optimization of the fragmentation in a frit-fast atom bombardment ion source for the sequencing of peptides at the picomole level
Dančík et al. De novo peptide sequencing via tandem mass spectrometry: A graph-theoretical approach
Hall et al. Mass spectrometric identification of proteins isolated by two-dimensional gel electrophoresis