WO2001029262A3 - Genotyping reagents, kits and methods of use thereof - Google Patents

Genotyping reagents, kits and methods of use thereof Download PDF

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Publication number
WO2001029262A3
WO2001029262A3 PCT/US2000/028436 US0028436W WO0129262A3 WO 2001029262 A3 WO2001029262 A3 WO 2001029262A3 US 0028436 W US0028436 W US 0028436W WO 0129262 A3 WO0129262 A3 WO 0129262A3
Authority
WO
WIPO (PCT)
Prior art keywords
methods
kits
genotyping
oligonucleotides
reagents
Prior art date
Application number
PCT/US2000/028436
Other languages
French (fr)
Other versions
WO2001029262A2 (en
Inventor
Leslie Picoult-Newburg
Mark Pohl
Original Assignee
Orchid Biosciences Inc
Leslie Picoult-Newburg
Mark Pohl
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Orchid Biosciences Inc, Leslie Picoult-Newburg, Mark Pohl filed Critical Orchid Biosciences Inc
Priority to AU10854/01A priority Critical patent/AU1085401A/en
Publication of WO2001029262A2 publication Critical patent/WO2001029262A2/en
Publication of WO2001029262A3 publication Critical patent/WO2001029262A3/en

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Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00—Oligonucleotides characterized by their use
    • C12Q2600/156—Polymorphic or mutational markers

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Organic Chemistry (AREA)
  • Analytical Chemistry (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Microbiology (AREA)
  • Immunology (AREA)
  • Molecular Biology (AREA)
  • Biotechnology (AREA)
  • Biophysics (AREA)
  • Physics & Mathematics (AREA)
  • Biochemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)

Abstract

The present invention provides oligonucleotides that can be used to determine the presence, absence or identity of a single nucleotide polymorphism (SNP), kits containing such oligonucleotides, and methods of genotyping a nucleic acid sample using such oligonucleotides.
PCT/US2000/028436 1999-10-15 2000-10-13 Genotyping reagents, kits and methods of use thereof WO2001029262A2 (en)

Priority Applications (1)

Application Number Priority Date Filing Date Title
AU10854/01A AU1085401A (en) 1999-10-15 2000-10-13 Genotyping reagents, kits and methods of use thereof

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US16009699P 1999-10-15 1999-10-15
US60/160,096 1999-10-15

Publications (2)

Publication Number Publication Date
WO2001029262A2 WO2001029262A2 (en) 2001-04-26
WO2001029262A3 true WO2001029262A3 (en) 2002-12-27

Family

ID=22575493

Family Applications (1)

Application Number Title Priority Date Filing Date
PCT/US2000/028436 WO2001029262A2 (en) 1999-10-15 2000-10-13 Genotyping reagents, kits and methods of use thereof

Country Status (2)

Country Link
AU (1) AU1085401A (en)
WO (1) WO2001029262A2 (en)

Cited By (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US9206478B2 (en) 2002-12-31 2015-12-08 Branhaven LLC Methods and systems for inferring bovine traits

Families Citing this family (11)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US6692959B2 (en) * 1998-11-25 2004-02-17 Isis Pharmaceuticals, Inc. Antisense modulation of IL-1 receptor-associated kinase-4 expression
DE10019252A1 (en) * 2000-04-18 2001-10-31 Klaus Karl Degitz Polydeoxyribonucleotides to inhibit ICAM-1 gene expression
KR100437625B1 (en) * 2001-09-17 2004-06-30 주식회사 마이진 Method for Dectecting the Single Nucleotide Polymorphism by Zip-Code Oligonucleotide Chip and Detection kit
FR2836484B1 (en) * 2002-02-25 2005-02-04 Assist Publ Hopitaux De Paris METHOD OF IN VITRO DETECTION OF CANCERS BY THE EVIDENCE OF ALLELIC IMBALANCES OF INSERT-DELETION MARKERS
US20060094010A1 (en) * 2002-06-28 2006-05-04 Giles Robert C Methods and compositions for analyzing comprised sample using single nucleotide polymorphism panels
AU2003250989A1 (en) * 2002-08-27 2004-03-19 Epigenomics Ag Method and nucleic acids for the analysis of breast cell proliferative disorders
ES2337573T3 (en) * 2004-10-19 2010-04-27 Mtm Laboratories Ag COMPOUNDS AND PROCEDURES FOR ESTIMATING THE STATE OF MICROSATELITES INSTABILITY (MSI).
WO2008063769A2 (en) 2006-10-10 2008-05-29 The Henry M.Jackson Foundation For The Advancement Of Military Medicine, Inc. Prostate cancer-specific alterations in erg gene expression and detection and treatment methods based on those alterations
WO2008153906A1 (en) * 2007-06-06 2008-12-18 Rappaport Family Institute For Research In The Medical Sciences Haptoglobin genotyping for prognosis and treatment of chronic vasospasm following subarachnoid hemorrhage (sah)
US9044493B2 (en) * 2009-08-11 2015-06-02 Curna, Inc. Treatment of Adiponectin related diseases by inhibition of natural antisense transcript to an Adiponectin
CA3079907A1 (en) * 2017-10-23 2019-05-02 Mark David Vincent Methods of treating cancer and/or enhancing sensitivity to cancer treatment by increasing tumor mutation burden or tumor indels

Non-Patent Citations (3)

* Cited by examiner, † Cited by third party
Title
DATABASE EMBL [online] 22 December 1999 (1999-12-22), "SHGC-140184, human Homo sapiens STS genomic, sequence tagged site", XP002191443, Database accession no. G62520 *
DATABASE EMBL [online] 22 December 1999 (1999-12-22), "SHGC-140185, human Homo sapiens STS genomic, sequence tagged site", XP002191442, Database accession no. G62521 *
NIKIFOROV T T ET AL: "Genetic Bit Analysis: A solid phase method for typing single nucleotide polymorphisms", NUCLEIC ACIDS RESEARCH, vol. 22, no. 20, 11 October 1994 (1994-10-11), pages 4167 - 4175, XP000606174 *

Cited By (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US9206478B2 (en) 2002-12-31 2015-12-08 Branhaven LLC Methods and systems for inferring bovine traits

Also Published As

Publication number Publication date
WO2001029262A2 (en) 2001-04-26
AU1085401A (en) 2001-04-30

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