CN113999863A - Method for improving water utilization efficiency of tomato crops - Google Patents
Method for improving water utilization efficiency of tomato crops Download PDFInfo
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- CN113999863A CN113999863A CN202111283433.9A CN202111283433A CN113999863A CN 113999863 A CN113999863 A CN 113999863A CN 202111283433 A CN202111283433 A CN 202111283433A CN 113999863 A CN113999863 A CN 113999863A
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Abstract
The invention discloses a method for improving the water utilization efficiency of tomato crops, belonging to the technical field of biology. The method specifically comprises knocking out or silencing SlALD1 gene in tomato crops. The invention obtains a tomato Slald1 gene mutant by using a CRISPR/Cas9 gene editing technology, and finds that the mutant can obviously improve the water utilization efficiency of plants, enhances the resistance to drought, and can be used for the seed selection of tomato germplasm with high water utilization efficiency.
Description
Technical Field
The invention relates to the technical field of biology, in particular to a method for improving the water utilization efficiency of tomato crops.
Background
Tomato (Solanum lycopersicum L.), the genus Solanum of the family solanaceae, is one of the vegetables and commercial crops with the widest cultivation area in the world. The lycopene rice has delicious taste, is rich in lycopene with antioxidant health care function, and is widely popular with consumers. However, tomato plants are relatively tall and have continuous flowering and fruit setting, require higher water demand than common green leaf vegetables, and are sensitive to soil moisture conditions.
Fresh water resources are more and more scarce along with global warming, regional rainfall difference, poor drainage and the like. Drought is becoming one of the most serious environmental challenges facing agricultural sustainability. Drought stress alters various physiological, biochemical and morphological characteristics of tomato plants. Drought usually causes closed leaf stomata, significant inhibition of photosynthesis, damage to cytoplasmic membranes, oxidative stress caused by excessive active oxygen, leaf wilting, limited stem elongation, flower and fruit dropping, etc., which seriously affect tomato growth and fruit yield and quality. Tomato, once subjected to drought stress, can cause yield reduction and even abstinence, and is extremely harmful. Therefore, it is very important to cultivate drought-resistant tomato plants with higher water utilization efficiency so as to reduce the yield loss caused by drought to the maximum extent. The plant water utilization efficiency refers to the CO fixed by the water consumed by the plant per unit mass2The amount of (or dry matter produced), i.e. the ratio of the rate of photosynthetic carbon assimilation to the transpiration rate during physiological plant activity, reflects the water consumption and adaptability of the plant to conditions of water deficit. The water utilization efficiency calculation formula of the single plant of the plant is as follows: plant water use efficiency is biological yield/water consumption. The utilization efficiency of plant water has gradually become an important judgment standard for crop drought resistance and water conservation. Therefore, the creation of germplasm resources with high water utilization efficiency plays an important role in the growth and development of tomato plants with large water demand.
Arabidopsis ALD1 is a transaminase AGD 2-like defense response protein 1, which is capable of removing alpha-amino groups from L-lysine and catalytically synthesizing Pipecolic acid (Pip) (Biochemical peptides and functional enzymes of Pipecolic acid biosynthesis in Plant immunity, Plant Physiol, 2017.). The synthetic pathway of pipecolic acid is conserved among different species, and the same Signaling pathway is found in tomato (amino pathway for N-hydroxy-pipecolic acid synthesis in tomato, Science Signaling, 2019.). In recent years, piperidine acid has been widely studied as a newly found substance capable of significantly improving the resistance of plants to pathogenic bacteria, and the biosynthesis and downstream hydroxylation modification pathways thereof have been studied (Flavin monooxygenic-generated n-hydroxypipecolic acid is a critical element of plant system immunity, Cell,2018.), but there are few reports on the resistance thereof to abiotic stress. The tomato SlALD1 gene is homologous to the Arabidopsis ALD1 gene, and the piperidine acid biosynthetic pathway is also conserved in tomato, but has not been studied for drought resistance.
In recent years, a rapid gene editing technology, namely regularly clustered short palindromic repeats (CRISPR)/CRISPR-associated protein 9(Cas9), is highly valued and becomes the hottest gene editing system at present. The CRISPR/Cas9 gene editing technology can specifically recognize target sites, so that target genes are edited at fixed points to obtain a gene knockout material, progeny can be subjected to selfing to screen a plant line which is edited by the target genes and does not contain Cas9, and the use of the prior controversial transgenic technology for introducing exogenous genes is avoided. The CRISPR/Cas9 gene editing technology precisely knocks out genes, thereby precisely changing crop traits, rapidly obtaining ideal germplasm, and greatly improving the problems of long period, uncontrollable result and the like in the traditional crossbreeding.
Disclosure of Invention
The invention provides a method for improving the water utilization efficiency of tomato crops, and provides a basis for cultivating tomato varieties with high water utilization efficiency.
The invention provides an application of SlALD1 gene in improving the water utilization efficiency of tomato crops, wherein the nucleotide sequence of the protein coding region of the SlALD1 gene is shown as SEQ ID No.1, the length of the protein coding region is 1311bp, and the DNA sequence of the whole gene is shown as SEQ ID No. 6.
Furthermore, the invention also provides application of a protein coded by the SlALD1 gene in improving the water utilization efficiency of tomato crops, wherein the amino acid sequence of the protein coded by the SlALD1 gene is shown in SEQ ID No. 2.
The protein coded by the SlALD1 gene is an enzyme for mediating the biosynthesis of pipecolic acid, consists of 436 amino acids and is transaminase.
According to the invention, firstly, the Arabidopsis thaliana ALD1 gene (gene number: AT2G13810, TAIR website 'https:// www.arabidopsis.org/') is subjected to homologous sequence comparison to obtain the SlALD1 gene (gene number: XM _004250704.4, NCBI website 'https:// www.ncbi.nlm.nih.gov/') with the highest homology in tomato. Sequence analysis is carried out on the SlALD1 gene through a CRISPR P2.0 website (https:// CRISPR. hzau. edu. cn/CRISPR2/), a PAM sequence is searched, a sequence 20bp before NGG is defined as sgRNA, and a sgRNA coding sequence which is positioned on a gene protein coding region and has high specificity is selected, wherein the DNA sequence of the sgRNA of the specific targeting SlALD1 gene protein coding region is shown as SEQ ID NO. 3.
The invention also provides a method for improving the water utilization efficiency of tomato crops, and specifically relates to knocking out or silencing SlALD1 genes in tomato crops.
Preferably, the nucleotide sequence of the protein coding region of the SlALD1 gene is shown in SEQ ID No. 1.
Specifically, the method comprises the following steps:
(1) selecting a target fragment for gene knockout from a protein coding region of a tomato SlALD1 gene, designing a primer, and constructing a vector for knocking out the SlALD1 gene;
(2) constructing agrobacterium gene engineering bacteria containing the carrier for knocking out the SlALD1 gene in the step (1);
(3) transforming the agrobacterium gene engineering bacteria in the step (2) into tomato crop cells, and culturing to obtain homozygous mutant strains which do not contain foreign proteins and are stably inherited.
Preferably, the vector for knocking out the SlALD1 gene is a CRISPR/Cas9 vector.
Further, the nucleotide sequence of the upstream primer for constructing the CRISPR/Cas9 vector is shown as SEQ ID No.4, and the nucleotide sequence of the downstream primer is shown as SEQ ID No. 5.
Specifically, the target fragment for gene knockout is a target fragment containing a PAM structure, and the nucleotide sequence of the first 20 bases of the PAM structure of the target fragment is shown as SEQ ID No. 3.
Preferably, the agrobacterium is agrobacterium GV 3101.
According to the invention, the hydrogen peroxide content in the Slald1 gene mutant plant under the drought condition is found to be obviously reduced compared with that of a control plant by measuring the hydrogen peroxide content in the tomato leaves.
Further, the gene can regulate and control the resistance of the tomato to drought by influencing the content of hydrogen peroxide in plants.
The regulation and control means that the SlALD1 gene changes the steady state of active oxygen in a plant body and weakens the resistance of the plant to drought by influencing the hydrogen peroxide content in the plant body.
The invention finds that the Slald1 gene mutant can obviously improve the water utilization efficiency of plants by determining the water utilization efficiency of the plants under the condition of long-term moderate water deficiency.
Compared with the prior art, the invention has the following beneficial effects:
the invention obtains a tomato Slald1 gene mutant by using a CRISPR/Cas9 gene editing technology, and finds that the mutant can obviously improve the water utilization efficiency of plants, enhances the resistance to drought, and can be used for the seed selection of tomato germplasm with high water utilization efficiency.
Drawings
Fig. 1 is a gene editing site map of T1 generation mutant plants obtained in example 2, in which Slald1#1 was missing one base compared to the control and Slald1# 2 was missing 91 bases compared to the control.
FIG. 2 is a plant diagram of a control group and a Slald1 gene mutant tomato under drought stress.
Fig. 3 is a graph of the conductivity of control and Slald1 gene mutant tomatoes under drought stress, wherein the lower case letters a, b represent significant differences at the 5% level between different plants.
FIG. 4 is a graph showing the change of hydrogen peroxide content in control group and tomato with mutant Slald1 gene.
Fig. 5 is a graph showing the water use efficiency of the control group and the solanum lycopersicum mutant with the Slald1 gene under the condition of long-term moderate water deficit.
Detailed Description
The present invention will be further described with reference to the following specific examples, which are only illustrative of the present invention, but the scope of the present invention is not limited thereto. Unless otherwise specified, the technical means used in the examples are well known to those skilled in the art, and the raw materials and kits used are commercially available.
The gene editing tomato background used in the examples below was the conventional wild type variety CR (Condine Red) of tomato, with CR tomato without gene editing as a control.
Example 1
And (3) construction of a CRISPR/Cas9 vector containing the specific sgRNA.
(1) The DNA sequence of SlALD1 gene (GenBank number: XM _004250704.4) is found on NCBI website "https:// www.ncbi.nlm.nih.gov/", the sequence is shown in SEQ ID NO.6, the website "https:// CRISPR. hzau. edu. cn/cgi-bin/CRISPR 2/CRISPR" is input, and the 20bp base sequence (SEQ ID NO.3) which has high on score and GC content of > 40% and is positioned in front of a PAM structure of a protein coding region is found.
CRISPR primers were designed as follows:
CRISPR pre-primer (SEQ ID NO. 4): GATTGTGTTCTCCAAACAATCCCAC, respectively;
CRISPR rear primer (SEQ ID NO. 5): AAACGTGGGATTGTTTGGAGAACAC, respectively;
(2) and taking 5 mu L of each CRISPR front primer and rear primer, uniformly mixing, and annealing into double chains by using a PCR (polymerase chain reaction) instrument for coding single guide RNA (sgRNA), namely a sgRNA coding sequence.
(3) The intermediate vector pMD18-T is subjected to single enzyme digestion by BbsI, purified by a common DNA purification kit, annealed double chains are connected with the vector by T4 ligase, and the double chains are connected overnight at 16 ℃. The heat shock was applied at 42 ℃ to the transformation plates and the resistance of the vector pMD18-T was ampicillin.
(4) Monoclonal colonies were picked and verified by PCR using the CRISPR pre-primer and the vector post-primer (SEQ ID NO. 7).
(5) And (3) sending the bacterial liquid with the correct band size to a company for sequencing, wherein the sequencing result shows that the vector contains a sgRNA coding sequence, the quality-improved particles are subjected to double enzyme digestion by Hind III and Kpn I, and then are connected to a binary expression vector pCAMBIA 1301. And sequencing again to show that the final vector contains a sgRNA coding sequence, the obtained final plasmid is transferred into a GV3101 agrobacterium-infected state by electric shock, and spots are picked for PCR verification after two-day culture at 28 ℃ to obtain the agrobacterium strain which can be used for constructing a CRISPR/Cas9 gene editing material.
Example 2
Preparation and identification of Slald1 gene mutant material.
The sterilized tomato seeds were sown in the sowing medium, and the cotyledons were cut 7 days later. The final plasmid prepared in example 1 is transformed into cotyledons by adopting an agrobacterium infection method, and the totipotency of plant cells is utilized to obtain T0Tomato is edited by generation genes.
T0And (5) carrying out generation gene editing tomato seedling detection. Extraction of T by CTAB method0And (3) generating genome DNA of the plant, taking the genome DNA as a template, designing the following primers at about 200bp before and after the DNA sequence containing the sgRNA coding sequence, and performing PCR amplification sequencing verification:
primer before verification (SEQ ID NO. 8): CATTTCCAGTGAGTTACTCT, respectively;
verified primer (SEQ ID NO. 9): CTTTCTAGAACCCGGGATTT, respectively;
the PCR product obtained was sent to the company for sequencing. Comparing the sequencing result with the original sequence of the gene by using Snapgene software, selecting a plant with sgRNA coding sequence subjected to base deletion and sequencing to display a single peak, selfing and breeding to obtain T0Seeds of generations.
T above0Planting seeds in growth chamber to obtain T1Plants were used and T was detected by the same method as above1Base editing condition of sgRNA coding sequence of generation plant. Meanwhile, the CRISPR pre-primer (SEQ ID NO.4) and the carrier post-primer (SEQ ID NO.7) are used for carrying out T pair1And carrying out PCR amplification on DNA of the generation plants to detect whether the DNA contains a Cas9 sequence. Selecting T with sgRNA mutated and without Cas9 protein1Generation plants, two lines determined as gene editing plants, named Slald1# 1 and Slald1# 2 respectively, and the gene editing plants are obtained by the following stepsThe resulting editing sites are shown in FIG. 1. Compared with a control plant, Slald1# 1 lacks one base, and compared with a control plant, Slald1# 2 lacks 91 bases. The two strains T1After the generation seeds are self-bred, stable genetic T which does not contain exogenous gene Cas9 and has sgRNA mutation is obtained2And (5) plant generation.
The following examples all use the two homozygous lines T described above2The plants were used as material for the experiments.
Example 3
Study on drought resistance of Slald1 gene mutant.
Selecting tomato plants with 4 leaves and one core in a tray, and pouring enough water at the bottom of the tray to ensure that the plants are full of water. And pouring out unabsorbed water in the plug after 3-5h, and starting water control and drought treatment. The ambient temperature is controlled at about 25 ℃, the relative humidity of air is about 75 percent, and the light intensity is about 400 mu mol/m2And s. And (5) carrying out drought treatment for 7 days, observing the wilting condition of the plants, and photographing and recording. The wilting condition of the plant can be characterized by the relative conductivity of the leaves, and the high relative conductivity can be used for indicating that the cell membrane permeability is large, the cells are seriously damaged, the wilting degree of the leaves is high, and the plant is more sensitive to drought.
As can be seen from fig. 2 and 3, the Slald1 gene mutant can significantly improve the drought resistance of tomato plants.
Example 4
And measuring the hydrogen peroxide content of the solarium lycopersicum L1 gene mutant and a control group.
(1) Extracting hydrogen peroxide:
grinding tomato leaf 0.3g with liquid nitrogen, adding 3mL HClO4(1M) homogenizing, and fully vortexing and mixing. Centrifuge at 4 deg.C and 6000rpm for 5min, pipette 2.5mL of supernatant into a new centrifuge tube, and add 4M KOH drop by drop while vortexing until pH is 6-7. 0.05g of activated charcoal was added, vortexed thoroughly for 30s, 4 ℃, 12000rpm, and centrifuged for 5 min. And sucking the supernatant into a clean centrifugal tube, and filtering the supernatant through a filter membrane of 0.22 mu m to obtain the extracted hydrogen peroxide.
(2) Preparing a reaction buffer solution:
0.0548g of ABTS was added to 100mL of potassium acetate solution (100mM, pH 4.4) to prepare a reaction buffer, which was dissolved by sonication and stored in the dark.
(3) Measurement of hydrogen peroxide content:
the sample hydrogen peroxide (1 mL), reaction buffer (1 mL) and POD (catalase) (4. mu.L) were aspirated and mixed by vortexing, the mixture was allowed to stand at room temperature for 3min, and the absorbance of hydrogen peroxide was measured at 412 nm. And calculating according to the standard curve of the hydrogen peroxide to obtain the content of the hydrogen peroxide.
As can be seen from fig. 4, under drought conditions, the hydrogen peroxide content in the Slald1 gene mutant was significantly reduced compared to the control plants, the steady state of active oxygen was protected, the degree of oxidative stress was reduced, and the drought resistance was improved.
Example 5
Under the condition of long-term moderate water deficit, the water utilization efficiency of the Slald1 gene mutant and the tomato of a control group is changed.
Tomato plants growing to 4 leaves and one heart are selected to be subjected to long-term moderate water deficit treatment, and a control group CK (75-85% of relative soil water content) and a moderate water deficit treatment group Drought (45-55% of relative soil water content) are subjected to weighing to monitor the soil water and record the irrigation amount of each time. And (3) putting the roots, stems and leaves of the plant treated by the long-term moderate water deficit treatment at the 30 th day into a 65 ℃ oven to be dried to constant weight, measuring the biological yield of the plant, and calculating the water utilization efficiency of the plant according to a formula. Fig. 5 shows the water utilization efficiency changes of tomato plants of the Slald1 gene mutant and the control group under the condition of long-term moderate water deficit. As shown in fig. 5, under the long-term moderate water deficit treatment, the water utilization efficiency of the solarium lycopersicum 1 gene mutant and the tomato plant of the control group is obviously higher than that of the solanum lycopersicum 1 gene mutant plant of the control group. The result shows that under the long-term moderate water deficiency treatment, the Slald1 gene mutant plant can improve the water utilization efficiency, so that the drought resistance of the plant is improved, and the application value is realized in the actual production.
Sequence listing
<110> Zhejiang university
<120> a method for improving the water utilization efficiency of tomato crops
<160> 9
<170> SIPOSequenceListing 1.0
<210> 1
<211> 1311
<212> DNA
<213> tomato (Solanum lycopersicum L.)
<400> 1
atgttttctc tttgcatgca acctagtgct agtttgaaag ttcaaagaga ggaaactatt 60
gggagtagag gttataatta ttcaacaaga gtagctcgca atccaaactt gaaaaagttg 120
caaaccaact atttgtttcc tgagatatta gaaagggagc ttaaacatgt ggagaagtac 180
ccaaatgcta aagtaattag ccttggaatt ggtgatacca cgcagccatt accccaacct 240
gtagctttaa gcatgtctaa ttatgcacgt gctctttcaa cacctcaagg gtatactggc 300
tacggactgg aacaagggaa caaggaacta agaagagcaa ttgcagaaac aatatataaa 360
gatcttttgg tagaagaaac tgagatcttt gtgtctgatg gtgcacaatg tgatctctca 420
agagttcagc tcctcttagg ttccaatgtg tcaattgctg tacaggatcc atcatttcca 480
ggatatatag attcaagtgt gattatgggg cagagtggtg atttgaagaa tgattcaggg 540
agatatggaa atataaaata catgaaatgc aacctagaga acgatttctt tccagatctg 600
tccaaaactg aaagaacaga tgttatcttc ttctgttctc caaacaatcc cactggtcat 660
gcagcatcta ggcaacaatt gcagcaactt gtagagtttg cacaagtaaa tggttcaatt 720
attgtgtatg atgcagctta ttctgcatat atttcagact caagccctaa atcaatttat 780
gaaatcccgg gttctagaaa ggttgccatt gagatctcat ctttctcaaa gacggctgga 840
ttcacaggcg ttcgtctagg atggactgta gtgcctaagg agctatttta tctaaatgga 900
tttcctgtta tacacgattt caatcgcata atatgtacta gctttaacgg tgcttccaat 960
atagctcagg ctggtggatt ggcttgccta tccccggaag gtttcaagga agttatgttt 1020
aaagtagact actataaaga gaatgcaagg atcttagttg aaactttcac ttcactaggg 1080
tttcgagttt atggaggtag caatgcgcct tatgtttggg ttcattttcc aggttcgaaa 1140
tcatggaatg tgttcaattg gattcttgat aagactcaca tcattacagt tcctggaatt 1200
ggatttggtc cagctggtga aggatacata agggtttctg cttttggacg cagagagaac 1260
atcttggaag catctaaaag actcataacc ttactttgtc acacaaatta a 1311
<210> 2
<211> 436
<212> PRT
<213> tomato (Solanum lycopersicum L.)
<400> 2
Met Phe Ser Leu Cys Met Gln Pro Ser Ala Ser Leu Lys Val Gln Arg
1 5 10 15
Glu Glu Thr Ile Gly Ser Arg Gly Tyr Asn Tyr Ser Thr Arg Val Ala
20 25 30
Arg Asn Pro Asn Leu Lys Lys Leu Gln Thr Asn Tyr Leu Phe Pro Glu
35 40 45
Ile Leu Glu Arg Glu Leu Lys His Val Glu Lys Tyr Pro Asn Ala Lys
50 55 60
Val Ile Ser Leu Gly Ile Gly Asp Thr Thr Gln Pro Leu Pro Gln Pro
65 70 75 80
Val Ala Leu Ser Met Ser Asn Tyr Ala Arg Ala Leu Ser Thr Pro Gln
85 90 95
Gly Tyr Thr Gly Tyr Gly Leu Glu Gln Gly Asn Lys Glu Leu Arg Arg
100 105 110
Ala Ile Ala Glu Thr Ile Tyr Lys Asp Leu Leu Val Glu Glu Thr Glu
115 120 125
Ile Phe Val Ser Asp Gly Ala Gln Cys Asp Leu Ser Arg Val Gln Leu
130 135 140
Leu Leu Gly Ser Asn Val Ser Ile Ala Val Gln Asp Pro Ser Phe Pro
145 150 155 160
Gly Tyr Ile Asp Ser Ser Val Ile Met Gly Gln Ser Gly Asp Leu Lys
165 170 175
Asn Asp Ser Gly Arg Tyr Gly Asn Ile Lys Tyr Met Lys Cys Asn Leu
180 185 190
Glu Asn Asp Phe Phe Pro Asp Leu Ser Lys Thr Glu Arg Thr Asp Val
195 200 205
Ile Phe Phe Cys Ser Pro Asn Asn Pro Thr Gly His Ala Ala Ser Arg
210 215 220
Gln Gln Leu Gln Gln Leu Val Glu Phe Ala Gln Val Asn Gly Ser Ile
225 230 235 240
Ile Val Tyr Asp Ala Ala Tyr Ser Ala Tyr Ile Ser Asp Ser Ser Pro
245 250 255
Lys Ser Ile Tyr Glu Ile Pro Gly Ser Arg Lys Val Ala Ile Glu Ile
260 265 270
Ser Ser Phe Ser Lys Thr Ala Gly Phe Thr Gly Val Arg Leu Gly Trp
275 280 285
Thr Val Val Pro Lys Glu Leu Phe Tyr Leu Asn Gly Phe Pro Val Ile
290 295 300
His Asp Phe Asn Arg Ile Ile Cys Thr Ser Phe Asn Gly Ala Ser Asn
305 310 315 320
Ile Ala Gln Ala Gly Gly Leu Ala Cys Leu Ser Pro Glu Gly Phe Lys
325 330 335
Glu Val Met Phe Lys Val Asp Tyr Tyr Lys Glu Asn Ala Arg Ile Leu
340 345 350
Val Glu Thr Phe Thr Ser Leu Gly Phe Arg Val Tyr Gly Gly Ser Asn
355 360 365
Ala Pro Tyr Val Trp Val His Phe Pro Gly Ser Lys Ser Trp Asn Val
370 375 380
Phe Asn Trp Ile Leu Asp Lys Thr His Ile Ile Thr Val Pro Gly Ile
385 390 395 400
Gly Phe Gly Pro Ala Gly Glu Gly Tyr Ile Arg Val Ser Ala Phe Gly
405 410 415
Arg Arg Glu Asn Ile Leu Glu Ala Ser Lys Arg Leu Ile Thr Leu Leu
420 425 430
Cys His Thr Asn
435
<210> 3
<211> 20
<212> DNA
<213> tomato (Solanum lycopersicum L.)
<400> 3
tgttctccaa acaatcccac 20
<210> 4
<211> 25
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 4
gattgtgttc tccaaacaat cccac 25
<210> 5
<211> 25
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 5
aaacgtggga ttgtttggag aacac 25
<210> 6
<211> 5857
<212> DNA
<213> tomato (Solanum lycopersicum L.)
<400> 6
atgttttctc tttgcatgca acctagtgct aggtgaactt tttttatcac ttcaactctt 60
ttatttattt attttttttc ttttctatca cttatttctt ctttcaaata atatatatgc 120
agtttgaaag ttcaaagaga ggaaactatt ggtatgagat tttaatttat tttaaattat 180
tattgttatt ttttttataa agaatttatt ttaaattatt ttattgtctt tcattttcat 240
tatgatatat tgatgttatt attcatgcag ggagtagagg ttataattat tcaacaagag 300
tagctcgcaa tccaaacttg aaaaagttgc aaaccaacta tttgtttcct gaggttagta 360
taattatact atatactctg atagatcgtt tggtgtatag aataagaata aatagtattg 420
aatacgaaaa tagtttgaaa taaaattctg acgtcatgtt tggaataact tatttcatca 480
attatatcat agtattaagt aataggataa attattctat atacatgatc gaataagtta 540
tcgtagaata attaattcta agataacgta tttccaacca aacaacctcc ttagggcttt 600
catgcttggt tctttaattt atccttaaaa ttacatgagt cgagataggg ccatctgaat 660
aaggtcgggg atgtaattaa tgtcaaattg atataatgat ataaaatagt gttgatattt 720
tagtaatatt tgaaacttga aaaagaaaca ccaaaaaata aatttaatat gcataaggtt 780
ttatcattta agaagcttta aaatattcaa taatgagaga ataaaaagag agaaaggcaa 840
atgaaaaaga taaatataaa aataataatg tagattcatg aaaatcataa tcagaatata 900
atcatgtaac aaaatagatt gtcatgtaag aaagaaatat tataattaac taaacactat 960
ttcatttctt ggattatctc aatgattctc atcttaaata aggtgaaaaa ataatcttat 1020
atctcttatc aaaaaaattc tttttagatt tatcaataca tagagatttg cttaacaaaa 1080
taaggggccc gaaatatatt gagaactcaa gagattattt tagtattttt atgatcgatc 1140
tatccctgaa tctaggtaat tttttttttt tgctttttaa tatatatata tatatatata 1200
tatatatata tatatatata tatatatata tatatatttg atggtgaggt attaattgtg 1260
tatttgtctt atttcacatg acagatatta gaaagggagc ttaaacatgt ggagaagtac 1320
ccaaatgcta aagtaattag ccttggaatt ggtgatacca cgcagccatt accccaacct 1380
gtagctttaa gcatgtctaa tgtgcgtaac ataaatcatc aactattttt actgctcaat 1440
gtgtttaaat tgacttgttt ttactgattt ttgattttta agttattttt gtttgtttgt 1500
tatagagcgt tcaaataata taaacgtttt aaaaagtatt ttgtaagctg aaaatgtact 1560
aaaatattac aagaatacaa aagtcagata tgggacattc ctaacatatt tttgactttt 1620
agcttatata tatatatcac gtttaaaaaa tcaatccaaa cacacaaata tatatattat 1680
aaatgttaca ataatatttt tgatttaccc ctaaataagc tggaattttc aaatgctttt 1740
ggttgttaat attaccaaaa ggccaacgga tggaataaaa taagtttgaa tattttaagc 1800
attttccaca aaaggatttc ggggaagttt aaggatttct cttgtctaaa agatcaaaaa 1860
taaattaatc taacatatat acactataat aaaatgacta ttagcgatat ttaattctta 1920
attatcgcta aaatatatat ttttagcaac aattgtcact ttttatatat gtctctaaag 1980
tctttagcga caataatttt aataacatta aactaataca aataaaaact ttaaccctct 2040
ttattagtgt caatatttaa taccaataaa aattattttt attatagtaa tattagcaca 2100
tgtttttaaa aatattcgaa gaataattca aaattttaaa gaagaccata gagaaaccgg 2160
agttgacttc aaagtccaaa taatgtaatt ccacaacctt tatttttatg ttttgattta 2220
attttactgt catatcattc taaatgaaca cccctgtttt aaacattgga ccctagacgt 2280
caaacaacaa aatcttttac tctaaaaatt attatgatat tttctttcgt cctattttat 2340
gtgaggtatt ttaatttggt ataaactttt taaatttttt ttttaaaatt tatgatctag 2400
aataaactat aaaaatttat gcaattgtag atcattttat taaaaataac ataaatattt 2460
tagattaaat tattatttaa tataaaaata tatcgttcat tataattttt acttgcagta 2520
tgcacgtgct ctttcaacac ctcaagggta tactggctac ggactggaac aagggaacaa 2580
ggtgggtcat actctttctt tattttctga gttaaatata tttatatcga tgtgttttgt 2640
acgaaagatc agaaaatatt taaaaattat tttttttgat tgtagatgga tactttattt 2700
tatattttgt atttgataaa taagtaagaa aatattattt caagggtact tcttcatatt 2760
tattgaattt ataggacata tatatttatt aagaaaaata tttagggata taatttaaaa 2820
ttatattttt cgctattatt cttttttaaa atcataaaat ataatgttgc aagtagtgca 2880
attaacctcc tagaatatat cacattttat taaaggaaaa aaataaatat gaaaaaaatt 2940
taaatatcta tttaaacttt aaacaattta attattttga acaatgaaaa aaacctaaaa 3000
aaacagttaa tatgaaatta agaaagtata ttttatctaa caaaatacgt gcaaaaattt 3060
caaagtgaag gttgagggag gagccaagtg aatttggaat atcacttgcg cacgtgtttt 3120
ccctgctttt attagagaag ttattttttt ttttttgaga aactttgtat taacttgagg 3180
gaaacagttt gactaaccaa acatagaaag attcaaacta acgtacttcc tttttattgc 3240
tgaccaaaca aaattaaagt aatattattg attgaatttg acaggaacta agaagagcaa 3300
ttgcagaaac aatatataaa gatcttttgg tagaagaaac tgagatcttt gtgtctgatg 3360
gtgcacaatg tgatctctca agagttcagg tatacttgca tattttcatt tttaatcggt 3420
ttaaaaaaga cataatttac aaacatgatt tttaacttga cgtcatccag taattatgac 3480
atttaacttt ggatatgcac aagtagacat ttaaacttgt ataaaattga acaaatagat 3540
acattcgtcc tacatgacat cctatatgat aattttactt cctacgtggc atcctacgtg 3600
tactatgtca tataggacat gtgtgtttac ttattcattt ttatataagt ttaagtgtct 3660
acttgtgcac actcaaaatt ggaggacata attttccgct gaagtcaagt taagaatcac 3720
gtttatgtat tatgccttta aaaaacaatg ttgtctttct atatttgaaa gtaattgaac 3780
tttaaacttt tatttatcct taatcaataa tttatagtcg ctcaaatatt aaagacaaga 3840
tttataccac aaattctaga gatttttctt attgtactta ctaggggtgt taaaaatgag 3900
gccaattata gataactcat ccaatccgtc caaaattttc agggttgaat ttaggcataa 3960
tacataaata tagcctttaa cttggctttg aatcacattt atacctttca actttgggtg 4020
tgcacaagta gacacttaaa cttgtataaa gttgaacaaa tagacacatg tcctacgtat 4080
catcctacat ttcaaatttt gtcctacgtg tattgtgtca tgtagaattt atgtgtttat 4140
ttatttaaaa gttggatagt taaaatgctt gcttgtgcat tatgaaagtt gaaggtcaaa 4200
gttaaaattt taagtcaagt ttagggtcta atatatgtat tatgccttga atttaagata 4260
atttgaattg actataatct caattctcaa ctcattcgaa tcttacccga tttaaaagaa 4320
aatctttaat tgaatccaac ttcatctcta atttcaaccc attttaaaac ttttaattac 4380
tatattatca catactccct agttgtcatt gacctgcctt gtgccacaac aaattctttc 4440
ttgcagctcc tcttaggttc caatgtgtca attgctgtac aggatccatc atttccagtg 4500
agttactctt gctctcattt gtcttaatta aatttgcttt caacttaatt atttatactg 4560
ttataaacag agatataggt ggaggtaggt ggagttcacg ggttcggacg aatccactag 4620
tttttcgtag attctatatt tgtgttagaa aaatttaaat aaatatatat atatatatta 4680
acatgtgaac ctccaaacta ctaactttgg ctccgcctac agggatatat agattcaagt 4740
gtgattatgg ggcagagtgg tgatttgaag aatgattcag ggagatatgg aaatataaaa 4800
tacatgaaat gcaacctaga gaacgatttc tttccagatc tgtccaaaac tgaaagaaca 4860
gatgttatct tcttctgttc tccaaacaat cccactggtc atgcagcatc taggcaacaa 4920
ttgcagcaac ttgtagagtt tgcacaagta aatggttcaa ttattgtgta tgatgcagct 4980
tattctgcat atatttcaga ctcaagccct aaatcaattt atgaaatccc gggttctaga 5040
aaggtaatat tatgaaactt ttttagtgaa aaatgactcc tcccttccgt tttatatgac 5100
tctgcacgaa gtttaaaaaa gtaaaagaaa cttgtggtcc aaaatgaatg atagaaattt 5160
gtgtgattaa attgtaaatc atttcattaa ggttaaaata aatattttat agttaaatag 5220
ttactaatat aaaaacatgt cattcttttt gaaactaatt aaaaaggaaa gtaagtcaaa 5280
taaattgaga cagaggaaat ataacttata gattcatctt taaactgatt attatttctt 5340
actacaggtt gccattgaga tctcatcttt ctcaaagacg gctggattca caggcgttcg 5400
tctaggatgg actgtagtgc ctaaggagct attttatcta aatggatttc ctgttataca 5460
cgatttcaat cgcataatat gtactagctt taacggtgct tccaatatag ctcaggctgg 5520
tggattggct tgcctatccc cggaaggttt caaggaagtt atgtttaaag tagactacta 5580
taaagagaat gcaaggatct tagttgaaac tttcacttca ctagggtttc gagtttatgg 5640
aggtagcaat gcgccttatg tttgggttca ttttccaggt tcgaaatcat ggaatgtgtt 5700
caattggatt cttgataaga ctcacatcat tacagttcct ggaattggat ttggtccagc 5760
tggtgaagga tacataaggg tttctgcttt tggacgcaga gagaacatct tggaagcatc 5820
taaaagactc ataaccttac tttgtcacac aaattaa 5857
<210> 7
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 7
ctacttatcg tcatcgtctt tg 22
<210> 8
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 8
catttccagt gagttactct 20
<210> 9
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 9
ctttctagaa cccgggattt 20
Claims (9)
- The application of the SlALD1 gene in improving the water utilization efficiency of tomato crops is characterized in that the nucleotide sequence of a protein coding region of the SlALD1 gene is shown as SEQ ID No. 1.
- The application of the protein coded by the SlALD1 gene in improving the water utilization efficiency of tomato crops is characterized in that the amino acid sequence of the protein coded by the SlALD1 gene is shown in SEQ ID No. 2.
- 3. A method for improving the water utilization efficiency of tomato crops is characterized in that SlALD1 genes in the tomato crops are knocked out or silenced.
- 4. The method of claim 3, wherein the nucleotide sequence of the protein coding region of the SlALD1 gene is set forth in SEQ ID No. 1.
- 5. The method of claim 3, comprising the steps of:(1) selecting a target fragment for gene knockout from a protein coding region of a tomato SlALD1 gene, designing a primer, and constructing a vector for knocking out the SlALD1 gene;(2) constructing agrobacterium gene engineering bacteria containing the carrier for knocking out the SlALD1 gene in the step (1);(3) transforming the agrobacterium gene engineering bacteria in the step (2) into tomato cells, and culturing to obtain homozygous mutant strains which do not contain foreign proteins and are stably inherited.
- 6. The method of claim 5, wherein the vector for knocking out the SlALD1 gene is a CRISPR/Cas9 vector.
- 7. The method of claim 6, wherein the nucleotide sequence of the upstream primer and the nucleotide sequence of the downstream primer for constructing the CRISPR/Cas9 vector are respectively shown as SEQ ID No.4 and SEQ ID No.5, respectively.
- 8. The method of claim 5, wherein the target fragment for gene knockout is a target fragment containing a PAM structure, and the nucleotide sequence of the first 20 bases of the PAM structure of the target fragment is shown as SEQ ID No. 3.
- 9. The method of claim 5, wherein the genetically engineered Agrobacterium is the Agrobacterium GV3101 strain.
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Citations (4)
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CN104884629A (en) * | 2012-10-15 | 2015-09-02 | 基因组股份公司 | Microorganisms and methods for production of specific length fatty alcohols and related compounds |
US20180371490A1 (en) * | 2015-07-15 | 2018-12-27 | University Of Florida Research Foundation, Inc. | Use of elongator genes to improve plant disease resistance |
CN110468150A (en) * | 2019-08-21 | 2019-11-19 | 浙江大学 | RGS1 gene is improving widow according to the application under environment in tomato bacterial leaf spot resistance as negative regulatory factor |
CN113512558A (en) * | 2021-04-21 | 2021-10-19 | 浙江大学 | Method for improving resistance of tomatoes to bacterial wilt |
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CN104884629A (en) * | 2012-10-15 | 2015-09-02 | 基因组股份公司 | Microorganisms and methods for production of specific length fatty alcohols and related compounds |
US20180371490A1 (en) * | 2015-07-15 | 2018-12-27 | University Of Florida Research Foundation, Inc. | Use of elongator genes to improve plant disease resistance |
CN110468150A (en) * | 2019-08-21 | 2019-11-19 | 浙江大学 | RGS1 gene is improving widow according to the application under environment in tomato bacterial leaf spot resistance as negative regulatory factor |
CN113512558A (en) * | 2021-04-21 | 2021-10-19 | 浙江大学 | Method for improving resistance of tomatoes to bacterial wilt |
Non-Patent Citations (1)
Title |
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