Set Analysis
MethylR manual
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Acknowledgements
Welcome to methylR: DNA Methylation Data Analysis Pipeline
1
Methylysis
Feature Analysis
2
Multi-D Analysis
3
Gene Features analysis
4
Pairwise analysis (Heatmap)
5
Volcano plot
6
Chromosome plot
Association Study
7
Gene Ontology (GO) enrichment analysis
8
Pathway enrichment analysis
Set Analysis
9
Venn analysis
10
UpSet Plots
Appendices
A
Create the input zip file for
methylR
B
Use of Docker Container
C
Convert DMCs table to BED
D
Time calculation
E
FAQs/Troubleshooting
References
Set Analysis
Copyright © 2022-2023. Massimiliano Volpe and Jyotirmoy Das.
8
Pathway enrichment analysis
9
Venn analysis
