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CoNuSeg

Implementation for "Continual Nuclei Segmentation via Prototype-wise Relation Distillation and Contrastive Learning".

Key Fuctions

  • utils/loss.py - PrototypeWiseRelationDistillationLoss: Prototype-wise Relation Distillation
  • utils/loss.py - PrototypeWiseContrastiveLoss: Prototype-wise Contrastive Learning

Getting Started

python  run.py \
--logdir $logdir \ # path to save log and checkpoint
--dataset monusac \ # dataset name
--name $name \ # experiment name
--task 1-1 \ # incremental task type
--step 0 \ # incremental step
--step_ckpt $step_ckpt \ # path to load checkpoint, invalid for step==0
--gpu $gpu # CUDA_VISIBLE_DEVICES=$gpu

Citation

@article{wu2023continual,
  title={Continual Nuclei Segmentation via Prototype-wise Relation Distillation and Contrastive Learning},
  author={Wu, Huisi and Wang, Zhaoze and Zhao, Zebin and Chen, Cheng and Qin, Jing},
  journal={IEEE transactions on medical imaging},
  year={2023},
  publisher={IEEE}
}

Acknowledgement

This repo is based on SDR

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