温州大学《机器学习》课程资料（代码、课件等）

单细胞分析的中文pipeline

EasyMultiOmics: An R package for comprehensive multi-omics data mining in systematic microbiome research

The scripts used in the study of ecological status in global ocean

生信常用分析

scripts associated with NAFLD-NASH project

code for analysis related to Hochgerner et al 2022

This repository contains the code used to generate figures and perform analysis for the manuscript titled "Transcriptomic and Spatial Proteomic Profiling Reveals the Cellular Composition and Spatia…

Repository to store code used for the analyses presented in "Defining the Regulatory Logic of Breast Cancer Using Single-Cell Epigenetic And Transcriptome Profiling"

This repository holds the scripts used to analyze the data presented in "A multi-omic single-cell landscape of human gynecologic malignancies", Regner et al., 2021

Keystone species of NAFLD

scripts for viral metagenomics in the ARG project

R scripts for metagenomic analysis

Script to generate taxonomy plot from metagenomic samples

Scripts utilized for the analysis of metagenomics and IMP data.

the R script for meta-analysis of metagenomic datasets across cohorts using different methods, thus give each feature a score

codes and scripts to run MetaG tools

Project scripts for metagenomic survey between 3 EBPR and 3 S2EBPR WRRFs.

Range of scripts, that allow to read metagenomic analisys data, checking assotiation between deseases and bacteria genomes, them making prediction, which genomes may cause illness

This repository includes all the scripts used for metagenomic analysis of data obtained from the Calakmul Biosphere Reserve.

Repository for 100-year-old fly metagenomics (OC) paper scripts, metadata and plots

The scripts in this repo compose the bioinformatic pipeline used to collect and analyze publicly available human get metagenomic sequence data. Samples in this project were from modern-industrial s…

De novo Extraction of Strains from MetAgeNomes

Statistical analysis for sparse high-throughput sequencing

A python pipeline to identify IS (Insertion Sequence) elements in genome and metagenome

Precise phylogenetic analysis of microbial isolates and genomes from metagenomes

CAMISIM: Simulating metagenomes and microbial communities

This repository provides scripts for the 16S microbiome analysis and metagenome prediction using linux and R-Studio