Multi-Voxel Pattern Analysis (whole-brain searchlight) using Support Vector Machine Classification & Regression

MultiVariate Pattern Analysis in Python

A statistics and context decoding toolbox for neuroimaging.

BIDS App for Hippunfold (automated hippocampal unfolding and subfield segmentation)

MVPA by cross-validated MANOVA

A set of BIDS compatible datasets with empty raw data files that can be used for writing lightweight software tests.

ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at [email protected]. Development details can be found unde…

The source code that powers readthedocs.org

MarsBaR region of interest toolbox for SPM

CUDA Diffusion Modelling Toolbox

Build and run containers leveraging NVIDIA GPUs

Code and tutorials to visualise your data that is both beautiful *and* statistically valid

All-in-one toolbox for processing of magnetic resonance spectroscopy data.

Accelerated Microstructure Imaging via Convex Optimization (AMICO) from diffusion MRI data

Pipeline to perform logistic regression and combinatorial AUC derivation. Demonstrates that a combination of diffusion analysis modalities (NODDI + tensors) can predict age and cognition better tha…

micapipe from the Multimodal imaging and connectome analysis lab (http:https://mica-mni.github.io) at the Montreal Neurological Institute. Read The Docs documentation below

MRI analysis pipeline optimized for submillimeter MP2RAGE datasets

Quantitative MRI Made Easy with qMRLab: MRI software for data Simulation, analysis and visualization

QSMxT is an end-to-end software toolbox for Quantitative Susceptibility Mapping.

Ironsmith is a comprehensive, fully automated pipeline for creating and processing Quantitative Susceptibility Maps (QSM), extracting QSM based iron concentrations from subcortical and cortical bra…

List of open-source quantitative susceptibility mapping (QSM) MRI software packages and data

This repository contains the files that generate Andy's Brain Book on ReadTheDocs.

Support for CMRR multi-band pulse sequences

Read, modify and write DICOM files with python code

A python script for parsing motion info in vNav DICOM series

A python script for parsing motion info in vNav DICOM series