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gfanno Public
Forked from qunjie-zhang/gfannoGene Family Annotation Workflow
Python Apache License 2.0 UpdatedMar 26, 2024 -
Chromosome_evolution_Lepidoptera_MS Public
Forked from charlottewright/Chromosome_evolution_Lepidoptera_MSScripts associated with 'Chromosome Evolution in Lepidoptera' manuscript
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Population_genomics_pipline Public
Forked from xiao-xiaoping/Population_genomics_pipline10.1186/s12915-024-01844-x
Shell UpdatedJan 3, 2024 -
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MerquryRising Public
Forked from slimsuite/MerquryRisingMerqury parsing and comparison for genome assembly purging QC
HTML GNU General Public License v3.0 UpdatedDec 8, 2023 -
postitve_selection_scripts Public
Forked from A-Saji/postitve_selection_scriptsScripts used for calculating positive selection in ortholg clusters of genes
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MEPmodeler Public
Forked from yuhuihui2011/MEPmodelerPredict MicroExons in Plant Genomes
R GNU General Public License v2.0 UpdatedOct 8, 2023 -
Passionfruit_Genomic_Database Public
Forked from yuchaowei2023/Passionfruit_Genomic_DatabaseJavaScript UpdatedSep 26, 2023 -
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Administrative-divisions-of-China Public
Forked from modood/Administrative-divisions-of-China中华人民共和国行政区划:省级(省份)、 地级(城市)、 县级(区县)、 乡级(乡镇街道)、 村级(村委会居委会) ,中国省市区镇村二级三级四级五级联动地址数据。
JavaScript Do What The F*ck You Want To Public License UpdatedSep 13, 2023 -
Icca Public
Forked from panlab-bio/IccaWe propose a novel method that is able to identify and fill the gaps in the chromosome-level assembly by recalling the sequences in the lost small contigs.
Python UpdatedSep 12, 2023 -
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allele_frequencies Public
Forked from rhysf/allele_frequenciescalculate allele frequencies from mpileup format
Perl MIT License UpdatedSep 7, 2023 -
old-usefully_sofetware Public
We often encounter some software download methods change or the original website does not exist. This brings a lot of troubles to our subsequent analysis. So this warehouse will collect those old b…
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AlleleFinder Public
Forked from sc-zhang/AlleleFinderAlleleFinder is a tool for identifying allele genes from polyploid genome.
Python UpdatedAug 24, 2023 -
RADTE Public
Forked from kfuku52/RADTEDivergence time estimation in the complex history of gene family evolution
Jupyter Notebook MIT License UpdatedAug 11, 2023 -
TreeShrink Public
Forked from uym2/TreeShrinkImplementation of the TreeShrink problem
Python GNU General Public License v3.0 UpdatedAug 7, 2023 -
chicken-T2T Public
Forked from lurebgi/chicken-T2TScripts that used in our chicken T2T manuscript.
Shell MIT License UpdatedJul 6, 2023 -
Genome-annotation-pipeline Public
Forked from meiyang12/Genome-annotation-pipelineGenome annotation pipeline
Perl UpdatedJun 28, 2023 -
catfish-genome Public
Forked from bbalog87/catfish-genomePipelines, code and ressources for creating a fully haplotype-resolved T2T assembly of the African catfish (Clarias gariepinus) combining PacBio HiFi, ONT long reads and Hi-C data.
R UpdatedJun 26, 2023 -
fasta_windows Public
Forked from tolkit/fasta_windowsA Rust implementation of sliding window stats over fastas.
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KrakenTools Public
Forked from jenniferlu717/KrakenToolsKrakenTools provides individual scripts to analyze Kraken/Kraken2/Bracken/KrakenUniq output files
Python GNU General Public License v3.0 UpdatedJun 1, 2023 -
Kmer-based-Subgenome-Mapping Public
Forked from amsession/Kmer-based-Subgenome-MappingR UpdatedApr 18, 2023 -
Plant_Annotation_TEs Public
Forked from amvarani/Plant_Annotation_TEsMethods and recipes for Plant Genome Annotation - Transposable Elements
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shinyCircos2 Public
Forked from ChiquittoBioinfo/shinyCircos2ShinyCircos plot - 2
R UpdatedMar 27, 2023 -
ArmywormGenome Public
Forked from hanjabolgo/ArmywormGenomeCode for the armymorm genome project https://onlinelibrary.wiley.com/doi/10.1111/1755-0998.13809
Shell Creative Commons Zero v1.0 Universal UpdatedFeb 12, 2023 -
GoogleTranslateIpCheck Public
Forked from Ponderfly/GoogleTranslateIpCheckC# MIT License UpdatedFeb 11, 2023