added layer 2 fixed pre-connections

WarIO.lua

@@ -89,7 +89,13 @@ function getRandomGenome(number)
  nodes1[j][k] = {}
  nodes1[j][k].weightA = math.random() - 0.5
  nodes1[j][k].weightB = math.random() * 0.1
- nodes1[j][k].out = math.floor(math.random(6))
+ nodes1[j][k].out = {}
+ nodes1[j][j].out[1] = true
+ nodes1[j][j].out[2] = true
+ nodes1[j][j].out[3] = true
+ nodes1[j][j].out[4] = true
+ nodes1[j][j].out[5] = true
+ nodes1[j][j].out[6] = true
  nodes1[j][k].value = 0
  end
  end
@@ -129,8 +135,10 @@ function testSpecie(specie, blocks)
  local nodes2 = specie.layer2
  for i = 0, 16 do
  for j = 0, 13 do
- nodes2[nodes1[i][j].out].value = nodes2[nodes1[i][j].out].value + nodes1[i][j].value
- nodes2[nodes1[i][j].out].numberToAverage = nodes2[nodes1[i][j].out].numberToAverage + 1
+ for k = 1, 6 do
+ if (nodes2[nodes1[i][j]].out[k]) then
+ nodes2[nodes1[i][j].out[k]].value = nodes2[nodes1[i][j].out[k]].value + nodes1[i][j].value
+ nodes2[nodes1[i][j].out[k]].numberToAverage = nodes2[nodes1[i][j].out[k]].numberToAverage + 1
  end
  end
  for i = 0, 6 do
@@ -304,12 +312,14 @@ function breed(oldGenome)
  newGenome[i].layer1[j][k].weightB = parentB.layer1[j][k].weightB
  end
 
- if (math.random() > 0.5) then
- newGenome[i].layer1[j][k].out = parentA.layer1[j][k].out
- else
- newGenome[i].layer1[j][k].out = parentB.layer1[j][k].out
+ for j = 1, 6 do
+ if (math.random() > 0.5) then
+ newGenome[i].layer1[j][k].out[j] = parentA.layer1[j][k].out[j]
+ else
+ newGenome[i].layer1[j][k].out[j] = parentB.layer1[j][k].out[j]
+ end
  end
-
+ 
  newGenome[i].value = 0
 
  if (math.random() < mutationRate) then
@@ -398,7 +408,12 @@ function saveGenome(genome, filename)
  for k = 0, 13 do
  file:write(genome[i].layer1[j][k].weightA .. "\n")
  file:write(genome[i].layer1[j][k].weightB .. "\n")
- file:write(genome[i].layer1[j][k].out .. "\n")
+ file:write(genome[i].layer1[j][k].out[1] .. "\n")
+ file:write(genome[i].layer1[j][k].out[2] .. "\n")
+ file:write(genome[i].layer1[j][k].out[3] .. "\n")
+ file:write(genome[i].layer1[j][k].out[4] .. "\n")
+ file:write(genome[i].layer1[j][k].out[5] .. "\n")
+ file:write(genome[i].layer1[j][k].out[6] .. "\n")
  end
  end
  file:write("\n\n\n")