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.ipynb_checkpoints
.ipynb_checkpoints
 
 
data
data
 
 
outputs
outputs
 
 
src
src
 
 
Hopf_point.ipynb
Hopf_point.ipynb
 
 
README
README
 
 
example.ipynb
example.ipynb
 
 
example.jl
example.jl
 
 
finding_period_and_amplitude.ipynb
finding_period_and_amplitude.ipynb
 
 
minimal_model.ipynb
minimal_model.ipynb
 
 
p_KaiC_bistability.ipynb
p_KaiC_bistability.ipynb
 
 
period_vs_doubling_time.ipynb
period_vs_doubling_time.ipynb
 
 
period_vs_doubling_time_with_feedback.ipynb
period_vs_doubling_time_with_feedback.ipynb
 
 
phase_response_curve.ipynb
phase_response_curve.ipynb
 
 
theory_experiment_comparison.ipynb
theory_experiment_comparison.ipynb
 
 

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# KaiABC

Mathematical descriptions for the cyanobacterial circadian oscillator
which consists of protein KaiA, KaiB, and KaiC,
utilities to integrate and identify the period and the amplitude,
and related efforts to answer biological questions.

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