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  1. ANTs ANTs Public

    Forked from ANTsX/ANTs

    Advanced Normalization Tools (ANTs)

    C++

  2. CaImAn CaImAn Public

    Forked from flatironinstitute/CaImAn

    Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.

    Python

  3. nerds nerds Public

    Forked from KordingLab/nerds

    👼 Matlab package implementing blind deconvolution method for neural spike recovery

    Jupyter Notebook

  4. ZebrafishBrainRegistration_Zbrain_ANTs ZebrafishBrainRegistration_Zbrain_ANTs Public

    Forked from nvladimus/ZebrafishBrainRegistration_Zbrain_ANTs

    Non-rigid registration of zebrafish brains to the Z-Brain Atlas using ANTs

    Jupyter Notebook

  5. ffn ffn Public

    Forked from google/ffn

    Flood-Filling Networks for instance segmentation in 3d volumes.

    Python

  6. ZebrafishBrainBrowser ZebrafishBrainBrowser Public

    Forked from BurgessLab/ZebrafishBrainBrowser

    Tool for visualizing 3D expression data in zebrafish

    JavaScript