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Hifiasm: a haplotype-resolved assembler for accurate Hifi reads

Cufflinks compiled binaries for the Bioinformatics Toolbox

A Toolkit for analyzing next-generation DNA Re-Sequencing data

Picard library for manipulating SAM/BAM files.

FALCON-Phase integrates PacBio long-read assemblies with Phase Genomics Hi-C data to create phased, diploid, chromosome-scale scaffolds

最良心的 Python 教程：

Automatically exported from code.google.com/p/cdhit

a small build system with a focus on speed

Unix, R and python tools for genomics and data science

RNAseq analysis notes from Ming Tang

📚 免费的计算机编程类中文书籍，欢迎投稿

tools for error correction and working with long read data