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🍺 The missing package manager for macOS (or Linux)
Maximum likelihood inference of time stamped phylogenies and ancestral reconstruction
为GPT/GLM等LLM大语言模型提供实用化交互接口，特别优化论文阅读/润色/写作体验，模块化设计，支持自定义快捷按钮&函数插件，支持Python和C++等项目剖析&自译解功能，PDF/LaTex论文翻译&总结功能，支持并行问询多种LLM模型，支持chatglm3等本地模型。接入通义千问, deepseekcoder, 讯飞星火, 文心一言, llama2, rwkv, claude2, m…
An Interactive Desktop Platform for Drawing Gene Structure and Protein Architecture
Materials for Spring 2021 Applied Genomics Course
Materials for Spring 2018 Applied Genomics Course
Reconstruct Ancestral State in Phylogenies
Repository for code of the book "Bioinformatics Algorithms" by Miguel Rocha and Pedro Ferreira. Editor: Elsevier
A human-friendly and fast alternative to cut and (sometimes) awk
Convert SNPs in VCF format to PHYLIP, NEXUS, binary NEXUS, or FASTA alignments for phylogenetic analysis
Beautify the phylogenetic tree using one Excel sheet only
Cross-platform software to draw phylogenetic trees
Teaching materials for classes teaching programming to biologists
Turn your data frame into a tableau style drag and drop UI interface to build visualization in R.
A toolbox for identifying mobile genetic element (MGE) insertions from short-read sequencing data of bacterial isolates.
Welcome to the website and github repository for the Genome Analysis Module. This website will guide the learning experience for trainees in the UBC MSc Genetic Counselling Training Program, as the…
Run_dbcan V4, using genomes/metagenomes/proteomes of any assembled organisms (prokaryotes, fungi, plants, animals, viruses) to search for CAZymes.
MGnify genome analysis pipeline
A free, open source, multi-platform SQLite database manager.
Open-source scientific and technical publishing system built on Pandoc.