Biological foundation modeling from molecular to genome scale

Code and results accompanying our paper titled Mixture Proportion Estimation and PU Learning: A Modern Approach at Neurips 2021 (Spotlight)

Translate PDF, EPub, webpage, metadata, annotations, notes to the target language. Support 20+ translate services.

An open-source platform for developing protein models beyond AlphaFold.

[NeurIPS'23 Oral] Visual Instruction Tuning (LLaVA) built towards GPT-4V level capabilities and beyond.

open interpreter docker environment

OpenLLaMA, a permissively licensed open source reproduction of Meta AI’s LLaMA 7B trained on the RedPajama dataset

A natural language interface for computers

Experiments with expanded ensembles to explore chemical space

Optical character recognition for Japanese text, with the main focus being Japanese manga

Stable Diffusion Painting

Code for running RFdiffusion

Instruct-tune LLaMA on consumer hardware

Computational Chemistry Workflows

A cheminformatics toolkit for Rust.

🤗 Diffusers: State-of-the-art diffusion models for image and audio generation in PyTorch and FLAX.

OmegaFold Release Code

Bio-Computing Platform Featuring Large-Scale Representation Learning and Multi-Task Deep Learning “螺旋桨”生物计算工具集

Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2

Open source code for AlphaFold.

This package contains deep learning models and related scripts for RoseTTAFold

OpenCL for Rust

ProtTrans is providing state of the art pretrained language models for proteins. ProtTrans was trained on thousands of GPUs from Summit and hundreds of Google TPUs using Transformers Models.

Evolutionary Scale Modeling (esm): Pretrained language models for proteins

Exclude machine-translated sites of Stack Exchange from Google search results

Force fields produced by the Open Force Field Initiative

A general small molecule force field descended from AMBER99 and parm@Frosst, available in the SMIRNOFF format