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Releases: wtclarke/spec2nii

0.8.2

09 Jul 15:26
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0.8.2 (Tuesday 9th July 2024)

  • Fix for multiple GE HBCD sequence names.

0.8.1

03 Jul 14:34
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0.8.1 (Wednesday 3rd July 2024)

  • Bug fix for GE HBCD sequence.

0.8.0

03 Jul 09:57
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0.8.0 (Wednesday 3rd July 2024)

  • Dropped support for Python 3.8 (EOL imminent), added support and testing for 3.12.
  • Compatibility with Numpy 2.0

0.7.4

18 Apr 15:26
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0.7.4 (Thursday 18th April 2024)

  • Refinements and improvements to the GE SVS pipeline from Mark Mikkelsen.
  • Add support for older jMRUI text formats which have a slightly different syntax. With thanks to Donnie Cameron.
  • Handle odd case of XA like .twix headers in a VX baseline scan
  • Improved (and validated) handling of Dinesh Deelchand's slaser sequences with integrated references (svs_slaser(voi)_dkd(2))

V0.7.3

12 Mar 15:14
f63a418
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0.7.3 (Tuesday 12th March 2024)

  • Siemens .rda format now had corrected and validated orientations (tested on VE11 baseline).
  • Siemens .rda format now handles MRSI/CSI data and matches DICOM output. Validated on VE11 baseline data.
  • Fixes in Siemens Twix special case for universal editing sequence (HERMES conditions).
  • Added handling of custom Bruker sequences mt_sLASER, mt_MEGA_sLASER_V35 and cl_STELASER_PA360_b.
  • Philips vendor MEGA-PRESS handled through DICOM pathway. Thanks to Sandeep Ganji and Yansong Zhao for their help.

0.7.2

07 Dec 10:55
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0.7.2 (Thursday 7th December 2023)

  • SpectralWidth now added to header extension automatically to match bids specification.
  • NIfTI-MRS V0.8 now generated.
  • Better handling of philips spar/sdat tags and singleton dimensions.
  • Fixed bug where no name was set when a mixed folder of imaging and spectroscopy dicom was provided.

0.7.1

08 Nov 00:11
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0.7.1 (Tuesday 7th November 2023)

  • The --anon flag can be passed with any call to anonymise after writing files.
  • The Siemens enhanced DICOM filetype pathway now handles CSI data.
  • Fixed issue with RDA files having latin1 encoding. Thanks to gaunab on github. Fixes Issue #96.
  • Now support GE p-files up to version 30.0.

0.7.0

05 Aug 19:01
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0.7.0 (Saturday 5th August 2023)

  • Fixed a bug in Philips Classic DICOM orientations (supplementing the fixes to Enhanced DICOM in 0.6.11)
  • Updated Hyper sequence special case for Siemens Twix/.dat and GE.

V0.6.11

28 Jul 12:42
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0.6.11 (Friday 28th July 2023)

  • Fixed a bug in Philips spar/sdat orientations - this will affect voxels with rotations in more than one axes.
  • Fixed a bug in Philips DICOM orientations - this will affect voxels with rotations in more than one axes.
  • Python 3.7 now in end of life status and is no longer supported.
  • spec2nii dump/extract/insert can now be used to inspect and fix non-compliant NIfTI-MRS files.

V0.6.10

10 Jul 08:20
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0.6.10 (Monday 10th July 2023)

  • Stop tests being vendored as a top-level package. Bug introduced in 0.6.9.