updated

.eslintrc.js

@@ -0,0 +1,23 @@
+module.exports = {
+ root: true,
+ env: {
+ commonjs: true,
+ es2021: true,
+ jest: true,
+ node: true,
+ },
+ extends: [
+ 'airbnb-base',
+ 'plugin:import/recommended',
+ 'plugin:jest/recommended',
+ 'plugin:jest/style',
+ 'prettier', // Must be last to override other configs
+ ],
+ plugins: ['jest'],
+ parserOptions: {
+ ecmaVersion: 12,
+ },
+ rules: {
+ 'no-plusplus': 'off',
+ },
+};

.gitignore

@@ -1,3 +1,5 @@
+opentrees-data/
+tree-source/
 
 /data/
 
@@ -11,3 +13,116 @@
 /APC-taxon-2020-02-20-5349.csv
 /global_tree_search_trees_1_3.csv
 /out/
+# Project Specific
+node_modules
+data
+.DS_Store
+tmp
+
+# Logs
+logs
+*.log
+npm-debug.log*
+yarn-debug.log*
+yarn-error.log*
+lerna-debug.log*
+
+# Diagnostic reports (https://nodejs.org/api/report.html)
+report.[0-9]*.[0-9]*.[0-9]*.[0-9]*.json
+
+# Runtime data
+pids
+*.pid
+*.seed
+*.pid.lock
+
+# Directory for instrumented libs generated by jscoverage/JSCover
+lib-cov
+
+# Coverage directory used by tools like istanbul
+coverage
+*.lcov
+
+# nyc test coverage
+.nyc_output
+
+# Grunt intermediate storage (https://gruntjs.com/creating-plugins#storing-task-files)
+.grunt
+
+# Bower dependency directory (https://bower.io/)
+bower_components
+
+# node-waf configuration
+.lock-wscript
+
+# Compiled binary addons (https://nodejs.org/api/addons.html)
+build/Release
+
+# Dependency directories
+node_modules/
+jspm_packages/
+
+# TypeScript v1 declaration files
+typings/
+
+# TypeScript cache
+*.tsbuildinfo
+
+# Optional npm cache directory
+.npm
+
+# Optional eslint cache
+.eslintcache
+
+# Microbundle cache
+.rpt2_cache/
+.rts2_cache_cjs/
+.rts2_cache_es/
+.rts2_cache_umd/
+
+# Optional REPL history
+.node_repl_history
+
+# Output of 'npm pack'
+*.tgz
+
+# Yarn Integrity file
+.yarn-integrity
+
+# dotenv environment variables file
+.env
+.env.test
+
+# parcel-bundler cache (https://parceljs.org/)
+.cache
+
+# Next.js build output
+.next
+
+# Nuxt.js build / generate output
+.nuxt
+dist
+
+# Gatsby files
+.cache/
+# Comment in the public line in if your project uses Gatsby and *not* Next.js
+# https://nextjs.org/blog/next-9-1#public-directory-support
+# public
+
+# vuepress build output
+.vuepress/dist
+
+# Serverless directories
+.serverless/
+
+# FuseBox cache
+.fusebox/
+
+# DynamoDB Local files
+.dynamodb/
+
+# TernJS port file
+.tern-port
+
+opentrees-data/*
+tree-sources/*

.vscode/launch.json

@@ -0,0 +1,18 @@
+{
+ "version": "0.2.0",
+ "configurations": [
+ {
+ "name": "Debug Jest Tests",
+ "type": "node",
+ "request": "launch",
+ "runtimeArgs": [
+ "--inspect-brk",
+ "${workspaceRoot}/node_modules/.bin/jest",
+ "--runInBand"
+ ],
+ "console": "integratedTerminal",
+ "internalConsoleOptions": "neverOpen",
+ "port": 9229
+ }
+ ]
+}

.vscode/settings.json

@@ -0,0 +1,11 @@
+{
+ "editor.defaultFormatter": "esbenp.prettier-vscode",
+ "editor.formatOnSave": true,
+ "eslint.format.enable": true,
+ "editor.codeActionsOnSave": {
+ "source.fixAll.eslint": true
+ },
+ "[sql]": {
+ "editor.defaultFormatter": "mtxr.sqltools"
+ }
+}