Update CHANGELOG and CITATION for v1.4.1400 #70
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name: Test-uk-live | |
on: | |
pull_request: | |
push: | |
branches: [main] | |
jobs: | |
build: | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@v4 | |
- uses: DeLaGuardo/setup-clojure@master | |
with: | |
cli: latest | |
- name: Set up JDK 17 | |
uses: actions/setup-java@v4 | |
with: | |
distribution: 'zulu' | |
java-version: '17' | |
- name: Cache Maven packages | |
uses: actions/cache@v4 | |
with: | |
path: ~/.m2 | |
key: ${{ runner.os }}-m2-${{ hashFiles('**/deps.edn') }} | |
restore-keys: ${{ runner.os }}-m2 | |
- name: Install dependencies | |
run: clojure -P -M:test | |
- name: Compilation check | |
run: clojure -M:dev:check | |
- name: Create TRUD cache directory | |
run: mkdir trud | |
- name: Write out TRUD API key from secrets | |
run: echo ${{ secrets.TRUD_API_KEY }} >> api-key.txt | |
- name: Cache database | |
id: cache-db | |
uses: actions/cache@v4 | |
with: | |
path: snomed.db | |
key: ${{ github.sha }}-uk-clinical-db | |
- name: Install latest distributions for the UK | |
if: steps.cache-db.outputs.cache-hit != 'true' | |
run: clojure -M:run --db snomed.db install uk.nhs/sct-clinical --api-key api-key.txt --cache-dir trud | |
- name: Remove downloaded files | |
run: rm -rf trud | |
- name: Index database | |
if: steps.cache-db.outputs.cache-hit != 'true' | |
run: clojure -M:run --db snomed.db index | |
- name: Print status report | |
run: clojure -M:run --db snomed.db status | |
- name: Clojure tests | |
run: clojure -M:test |