improve $mode

wangqinhu · Sep 2, 2014 · e7b5ba0 · e7b5ba0
1 parent aba942f
commit e7b5ba0
Showing 1 changed file with 3 additions and 3 deletions.
diff --git a/tsRFinder.pl b/tsRFinder.pl
@@ -32,7 +32,7 @@
 init();
 
 # Global variables
-my $mode = $option{m} || $config{"mode"} || "run";
+my $mode = $option{m};
 my $label = $option{l} || $config{"label"};
 my $refseq = $option{g} || $config{"reference_genome"};
 my $trna = $option{t} || $config{"reference_tRNA"};
@@ -97,7 +97,7 @@ sub init {
  # Options
  getopts("m:c:l:g:t:s:a:n:x:e:u:f:w:o:hv", \%option) or die "$!\n" . usage();
 
- # Defualt mode: run
+ # Set defualt mode
  unless ($option{m}) {
  $option{m} = "run";
  }
@@ -169,7 +169,7 @@ sub init {
  # Graphics dependency: R
  check_install("R");
 
- # Indicating modes
+ # Check mode
  if ($option{m} eq "debug") {
  print_log("tsRFinder init success: Running in debug mode");
  } else {