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Exercises and supplementary material for the machine learning operations course at DTU.

Jupyter Notebook 558 431 Updated Aug 4, 2024
Makefile 11 13 Updated Apr 25, 2024

Cross-protein transfer learning for variant effect prediction

Jupyter Notebook 17 2 Updated Sep 13, 2023

Evolutionary Scale Modeling (esm): Pretrained language models for proteins

Python 3,051 598 Updated Feb 7, 2024

Code and tutorials to visualise your data that is both beautiful *and* statistically valid

HTML 812 217 Updated Mar 27, 2023

Foldseek enables fast and sensitive comparisons of large structure sets.

C 732 97 Updated Aug 3, 2024

A conda-forge distribution.

Shell 5,925 312 Updated Aug 4, 2024

A collection of *fold* tools

278 30 Updated Jul 5, 2024

GREMLIN is a method to learn a statistical model of a protein family that captures both conservation and co-evolution patterns in the family. The strength of measured co-evolution is strongly predi…

MATLAB 13 6 Updated Jul 3, 2016

PDBFixer fixes problems in PDB files

Python 449 113 Updated Jul 30, 2024

A deep learning-based tool to identify splice variants

Python 387 157 Updated Mar 19, 2024

OmegaFold Release Code

Python 537 77 Updated Dec 12, 2022

Making Protein Design accessible to all via Google Colab!

Python 531 120 Updated Jul 3, 2024

OmegaFold Release Code

Python 7 4 Updated Aug 15, 2022

Making Protein folding accessible to all!

Jupyter Notebook 1,824 469 Updated Jul 22, 2024

Software development pipelines related to the PRISM project

Python 7 4 Updated Jun 27, 2024

Machine Learning Foundations: Linear Algebra, Calculus, Statistics & Computer Science

Jupyter Notebook 3,223 1,552 Updated Jul 23, 2024