Please refer to the newest version at https://github.com/uncbiag/D2-SONATA.
This repository contains the code and experiments for our papers:
Perfusion Imaging: An Advection Diffusion Approach - IEEE TMI (In Minor Revision)
PIANO: Perfusion Imaging via Advection-Diffusion - MICCAI 2020 (Early Accept)
Training and evaluation environment: Python 3.11.4, PyTorch 2.0.1, CUDA 12.2. Run the following command to install the required packages.
conda create -n piano python=3.11
conda activate piano
git clone https://github.com/uncbiag/PIANO
cd /path/to/piano
pip install -r requirements.txt
cd learning
python demo_2d.py
cd learning
python learn_all_MRP.py
@misc{liu2020perfusion,
title={Perfusion Imaging: An Advection Diffusion Approach},
author={Peirong Liu and Yueh Z. Lee and Stephen R. Aylward and Marc Niethammer},
year={2020},
eprint={2009.02796},
archivePrefix={arXiv},
primaryClass={eess.IV}
}
@InProceedings{liu2020piano,
title="{PIANO}: Perfusion Imaging via Advection-Diffusion",
author={Peirong Liu and Yueh Z. Lee and Stephen R. Aylward and Marc Niethammer},
booktitle={Medical Image Computing and Computer Assisted Intervention (MICCAI)},
}