Add support for Gaea C5 (includes PR #1977: new ccpp SDFs added to support RRFS multiphysics ensemble and add tob in ocean output)(Includes PR #1997)

[ulmononian]

Description

Adds the capability to run the WM on Gaea c5.

A spack-stack-based module file is added, the cluster name is changed for compile jobs, and some logic in the RT scripts is added/modified.

Update: no longer removes c4 support. Just adds C5 as a new machine. some shared logic has been exploited in the spirit of minimal line additions.

Includes PR #1997 (new ccpp SDFs added to support RRFS multiphysics ensemble and add tob in ocean output (#2019).

Linked issue: #1755

Hera log :
RegressionTests_hera.log

Gaea-c5 log:
RegressionTests_gaea-c5.log

Input data additions/changes

• No changes are expected to input data.
• Changes are expected to input data:
  • New input data.
  • Updated input data.

Anticipated changes to regression tests:

• No changes are expected to any regression test.
• Changes are expected to the following tests:

New baseline required for "new" machine.

Subcomponents involved:

• AQM
• CDEPS
• CICE
• CMEPS
• CMakeModules
• FV3
• GOCART
• HYCOM
• MOM6
• NOAHMP
• WW3
• stochastic_physics
• none

Combined with PR's (If Applicable):

ulmononian#13

Commit Queue Checklist:

• Link PR's from all sub-components involved in section below
• Confirm reviews completed in ALL sub-component PR's
• Add all appropriate labels to this PR.
• Run full RT suite on either Hera/Cheyenne AND attach log to a PR comment.
• Add list of any failed regression tests to "Anticipated changes to regression tests" section.

Linked PR's and Issues:

Closes #1783
1997 fv3atm sub-pr #721

Testing Day Checklist:

• This PR is up-to-date with the top of all sub-component repositories except for those sub-components which are the subject of this PR.
• Move new/updated input data on RDHPCS Hera and propagate input data changes to all supported systems.

Testing Log (for CM's):

• RDHPCS
  • Hera
  • Orion
  • Jet
  • Gaea
  • Cheyenne
• WCOSS2
  • Dogwood/Cactus
  • Acorn
• CI
  • Completed
• opnReqTest
  • N/A
  • Log attached to comment

Contributors:

@natalie-perlin

[ulmononian]

cpld_control_p8 passes w/ intel compiler version upgrade to intel 2023.1.0 (/lustre/f2/scratch/Cameron.Book/FV3_RT/rt_134365).

[zach1221]

@ulmononian thanks for updating. I'll try running through the rt.conf so we can document any issues.

[ulmononian]

@ulmononian thanks for updating. I'll running through the rt.conf so we can document any issues.

i wouldn't bother running the full set of tests yet. i set up the wm to use rocoto on c5, but the partition specification (c5) that used to work for the run job_card is now resulting in an error. i am not sure what the partition needs set to now.

[zach1221]

@ulmononian thanks for updating. I'll running through the rt.conf so we can document any issues.

i wouldn't bother running the full set of tests yet. i set up the wm to use rocoto on c5, but the partition specification (c5) that used to work for the run job_card is now resulting in an error. i am not sure what the partition needs set to now.

I used ecflow on gaea c5 and only three tests failed.
RegressionTests_gaea_c5.txt

[ulmononian]

@zach1221 regarding the three failed tests:

regional_atmaq_debug is currently set to not run on gaea. do we also want to turn this off for gaea c5?

regional_atmaq and regional_atmaq_faster have clauses that set TPN in their respective test configuration files (i.e.:

ufs-weather-model/tests/tests/regional_atmaq

Line 103 in 7e9063d

elif [[ $MACHINE_ID = cheyenne || $MACHINE_ID = gaea ]]; then

and

ufs-weather-model/tests/tests/regional_atmaq_faster

Line 105 in 7e9063d

elif [[ $MACHINE_ID = gaea ]]; then

), respectively.

we can modify that logic so that the same TPN setting is done for gaea c5 and perhaps that will work.

[zach1221]

@zach1221 regarding the three failed tests:

regional_atmaq_debug is currently set to not run on gaea. do we also want to turn this off for gaea c5?

regional_atmaq and regional_atmaq_faster have clauses that set TPN in their respective test configuration files (i.e.:

ufs-weather-model/tests/tests/regional_atmaq

Line 103 in 7e9063d

elif [[ $MACHINE_ID = cheyenne || $MACHINE_ID = gaea ]]; then

and

ufs-weather-model/tests/tests/regional_atmaq_faster

Line 105 in 7e9063d

elif [[ $MACHINE_ID = gaea ]]; then

), respectively.
we can modify that logic so that the same TPN setting is done for gaea c5 and perhaps that will work.

Thanks @ulmononian . I hadn't looked into it yet, but maybe we can add the same config with Gaea C5, in regards to regional_atmaq and faster as you suggest, but also add the same thing to regional_atmaq_debug to see if it will pass as well on Gaea C5. I try it and see how it works.

[ulmononian]

@zach1221 im running those now and will let you know.

[ulmononian]

@zach1221 these three tests now pass with the TPN changes. i will push them shortly.

[ulmononian]

@zach1221 i pushed changes to fix the three tests that were failing. here's the path on c5 if you want to check: /lustre/f2/dev/Cameron.Book/c5_1707/tests. like we discussed, i did not use -c for these, so some of the result checks fail, but the model compiles and runs to completion.

[zach1221]

@zach1221 i pushed changes to fix the three tests that were failing. here's the path on c5 if you want to check: /lustre/f2/dev/Cameron.Book/c5_1707/tests. like we discussed, i did not use -c for these, so some of the result checks fail, but the model compiles and runs to completion.

Thanks @ulmononian ! Yes this is fine.

[ulmononian]

@ulmononian can you put the line to load nccmp in ufs_gaea-c5.intel.lua ?

done.

[zach1221]

Ok, testing is done and we can begin the merging process. @ulmononian can you review the open conversations in this PR, and resolve them, if possible?

[jkbk2004]

@zach1221 hold a bit. I need to push c5 log.

[zach1221]

@zach1221 hold a bit. I need to push c5 log.

Sure no problem!

[jkbk2004]

@ulmononian all sets now. Please, resolve all conversations.

[zach1221]

@jkbk2004 fv3atm hash: ba6e8ea442b2d0d5992a8550db6d0c720ff338d2

[ulmononian]

@jkbk2004 @zach1221 just checked but all convos look resolved.

[DeniseWorthen]

@natalie-perlin Needs to resolve her conversation

[jkbk2004]

@natalie-perlin this pr is ready to be merged. please, approve your request.

[natalie-perlin]

Thank you for finally pulling this through!