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Remove '#' from GDC_RELEASE_URL
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ayan-b committed Jun 3, 2019
1 parent 12171d1 commit 6c96398
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Showing 2 changed files with 2 additions and 2 deletions.
2 changes: 1 addition & 1 deletion xena_gdc_etl/scripts/panTCGA.py
Original file line number Diff line number Diff line change
Expand Up @@ -78,7 +78,7 @@ def main():
datatypes = ['htseq_counts', 'htseq_fpkm', 'htseq_fpkm-uq', 'mirna',
'masked_cnv', 'muse_snv', 'mutect2_snv', 'somaticsniper_snv',
'varscan2_snv', 'survival']
gdc_release = GDC_RELEASE_URL + 'data-release-100'
gdc_release = GDC_RELEASE_URL + '#data-release-100'
meta_templates_dir = os.path.join(
os.path.dirname(os.path.dirname(os.path.abspath(__file__))),
'Resources')
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2 changes: 1 addition & 1 deletion xena_gdc_etl/utils.py
Original file line number Diff line number Diff line change
Expand Up @@ -83,7 +83,7 @@ def merge(filelist, xena_dtypes, out_matrix):
k: os.path.join(meta_templates_dir, v)
for k, v in METADATA_TEMPLATE.items()
}
gdc_release = GDC_RELEASE_URL + 'data-release-90'
gdc_release = GDC_RELEASE_URL + '#data-release-90'
start_time = timeit.default_timer()
if xena_dtypes in ['htseq_counts', 'htseq_fpkm', 'htseq_fpkm-uq',
'mirna', 'methylation27']:
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